Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1530 ATGGATGATGGTCCTGGCAAAATAAACTTCATTCCTGATTACTTCCAAGTTCCAGCATCAGTTGCAAAATCCCCTGAGAACAGAACACCATTGATTACTGAACCTGGAACCAATAAATATTTGAGGTCCCGGCAGCATCTGTGGGGTCAGAGAACAATGAGGGCTGCTTCTATGTTGAGATTGTTTAGTCTGCGTGGGCTGCCATGGCTTGGTAATGGGGGTCAGGAAAAGGTTGAGCTAACAGCTGCAGAAGTAGAGTCACTTCGATCAGAACTTGCCGATATGGAAGAGAGAGAAGCTCAATTGAAAGCTCAGTTGGAAAATATCGATGAAATTTTGCGGTCATCTCGTCTTTCTGGATATTTGTACATTCGAAGTAGGTGGGCAACACTACCAGGAGAACCTCCACCTATAGATGACACAGACATAGATGATTGGCTTCCTCGCTTCATTGTTCTCCATGGTGCATGTCTGTATTTATATATGTTGTGTACAGATCTAAGTCCATTGGACTCCACGCTTCTGTCTGATATTGTTGAAGTAGGCGCTTTACCCAGTTTCAAGTGTGAAGATGATGAAATGCGATATGCCTTTTATATTTTAACTCCTCATGGATTACGTTATGAGTGTTCAAGCAATTCTAAGATAAAGGTAGACGCATGGTTATCAGCTTTACAAGCTGAGTGCAAATTGGATTCCGAAAAGATGACTTCTCAACTATTCAGATCCGCTTCCAGAGCCACCAGGTCTCTTCTCTCTGCTTCCAAGGCCTCTCGTTTCCACTCTGGCGCCGCTGCTGTAGTTTCGTTGAGGAGTAAAGCGCCGTGTTTGGTTTCAAGTTATGGAAAAAGCGGTTCTGGCAGTGCACCCGCTTCCTGGATTTCAGGAGCTCTTGCTCTCCCCGCCGCAGCTTACATGCTCCAAGATCAGGAGGTTCATGCTGCTGAGTTTGAACGCACTTTCATTGCCATTAAGCCTGATGGAGTGCAGAGAGGCCTGATTTCAGAGATTATATCTCGTTTCGAGCGCAAAGGCTACAAGCTTGTGGGGATCAAAGTGTTGGTTCCTTCAAAGGAATTTGCCAAGAAGCATTATCATGATCTCAGTGAAAGACCTTTCTTCAATGAGCTCTGTGACTTCCTAAGCTCTGGCCCTGTTATTGCAATGGTTTGGGAAGGAGAAGGAGTAATAACTTATGGCCGAAAACTAATTGGAGCCACTGATCCGCAGAAATCTGCTCCTGGAACTATTAGAGGTGATCTGGCTGTTAATGTTGGAAGAAATATCATCCATGGAAGTGATGGTCCAGAAACTGCTAAGGATGAGATTAAGTTGTGGTTTAAGCCAGAGGAGTTGGTTAGCTTTACCAGCAATGCCGAGAAGTGGATTTATGGTTCCAACTGA 1404 0.4466 MDDGPGKINFIPDYFQVPASVAKSPENRTPLITEPGTNKYLRSRQHLWGQRTMRAASMLRLFSLRGLPWLGNGGQEKVELTAAEVESLRSELADMEEREAQLKAQLENIDEILRSSRLSGYLYIRSRWATLPGEPPPIDDTDIDDWLPRFIVLHGACLYLYMLCTDLSPLDSTLLSDIVEVGALPSFKCEDDEMRYAFYILTPHGLRYECSSNSKIKVDAWLSALQAECKLDSEKMTSQLFRSASRATRSLLSASKASRFHSGAAAVVSLRSKAPCLVSSYGKSGSGSAPASWISGALALPAAAYMLQDQEVHAAEFERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVLVPSKEFAKKHYHDLSERPFFNELCDFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSAPGTIRGDLAVNVGRNIIHGSDGPETAKDEIKLWFKPEELVSFTSNAEKWIYGSN* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1530 467 CDD NDPk_I 318 447 - -
Ahy5g1530 467 PANTHER OS05G0595500 PROTEIN 1 236 - -
Ahy5g1530 467 Pfam Nucleoside diphosphate kinase 318 451 IPR034907 -
Ahy5g1530 467 SMART PH_update 116 232 IPR001849 -
Ahy5g1530 467 Gene3D - 308 465 IPR036850 -
Ahy5g1530 467 PRINTS Nucleoside diphosphate kinase signature 384 401 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Ahy5g1530 467 PRINTS Nucleoside diphosphate kinase signature 320 342 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Ahy5g1530 467 PRINTS Nucleoside diphosphate kinase signature 428 447 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Ahy5g1530 467 PRINTS Nucleoside diphosphate kinase signature 405 421 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Ahy5g1530 467 PRINTS Nucleoside diphosphate kinase signature 364 383 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Ahy5g1530 467 CDD PH 118 225 - -
Ahy5g1530 467 SMART ndk_5 317 454 IPR034907 -
Ahy5g1530 467 Hamap Nucleoside diphosphate kinase [ndk]. 317 452 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Ahy5g1530 467 Gene3D - 114 241 IPR011993 -
Ahy5g1530 467 ProSiteProfiles PH domain profile. 115 230 IPR001849 -
Ahy5g1530 467 SUPERFAMILY PH domain-like 109 229 - -
Ahy5g1530 467 SUPERFAMILY Nucleoside diphosphate kinase, NDK 317 464 IPR036850 -
Ahy5g1530 467 ProSitePatterns Nucleoside diphosphate kinases active site. 428 436 IPR023005 -
Ahy5g1530 467 Coils Coil 78 115 - -
Ahy5g1530 467 PANTHER OS05G0595500 PROTEIN 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1530 Ahy-Chr5 40544649 40550777 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1530 K00940 - pvy:116139377 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1530 5 40544649 40550777 Ahy13g2705 13 101187643 101191786 PCT
Ahy5g1530 5 40544649 40550777 Ahy3g2388 3 99952154 99956247 PCT