Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g1515 ATGTCAGCTGCTGATGTTGCTTTGAGTCCGATTCGGCAAGAATCGGCACATTGGCTTGGACCTCTCTCTGGTGAATCCATATTGATATATCTCACTGTGGATGGTGTTATGACTCCAATGCGTGTGTTGGAGTCAGATTCCATTTCTTCAGTGAAAATGAGGATTCAAACATGCACTGGAGTCTCAGGGAAGAAGCAAAAGCTTGTCTCTAATGGCAGAGAGCTTGCCCGCAATGATTCACTCATCAAGGATTACGGTGTCACTTCTGGGAATGTTGTTCATTTGGTTCTTCGTCTCTCTGATCTTATCTTCATTGTTGTAAGGACCACGACTGAGAAGGAGGTGGAGTTTCGTGTCGATCGGCATAGGAATGTTGCGTACCTCAAGCAGCATATTAAGAAGAAGGGGAAAGGCTCCATTGATATTGAAAATGAAGAATTTTTCTGTGATGGGGAAAAGCTTGATGATCAAAAGCTATTCCATGACATATGCAAGAGTGATGATGATGTGATTCATTTGATAGTTAAGAAATCATCAGCACAGGTTAAGGCCACACCAGTTCAAAAGGATTTGGAGCTTTCTGTTGAGGCTGCAACTGCACCATGTGTAGATGGAGAGAATACTAATCAAGCAACTAAGATTCCTCCACCTGGTGTAGATTTTTTGTTGGAACCAGTTATTGTGAATCCTAAGATCAATTTTTTCCCTTTCCTTTGGGACATGATCAACTCCACATTTGATGGTTTGAAGAATAAACATAATCCTATTAGGTCTTCTGAGGGCACAGGTGGTGCTTACCTCATGCAAGATTCATCAGGGATGGAATATGTTTCTGTGTTTAAGCCAATTGATGAGGAGCCAATGGCCGTGAACAATCCTCAAGGCCTGCCACTTTCGTCAAACGGCGAAGGGTTGAAAAGAGGGACAAAGGTGGGGGAAGGCGCCGTGAGAGAAGTCGCTGCATATGTATTGGATCATCCAAGGGCCGGGCCGCGTTTGGTGTCTGGTGAGGCTGTAGGCTTTGCTGGTGTTCCACCTACTGCTATGGTCAGGTGTTTGCATGAAGCATTTAATCACCCAGATGGATATGCTTGCTCAGCCAAGCATGTCAAGATGGGGTCATTGCAGATGTACATGAACAATGATGGCAACTGCGAGGACATTGGACCCGGTGCTTTTCCAGTGGAGGAGGTACATAAGATTACTCTTCTTGATATAAGAATGGCCAATGCAGATAGGCATGCTGGGAACATTTTGTTCAAGAAGGAGGCAGGTGGCCACATTTCTCTCATTCCTATTGATCACGGCTACTGTCTACCGGAACAATTTGAAGATTGCACATTTGATTGGCTATACTGGCCCCAAGCACGCCAACCTTACTCTGCTGATACAGTTGATTATATTAGGTCCCTGGATGCTGAGAAAGATATAGAACTTCTGAAATATTATGGGTGGGATGTTCCAGTTGAGTGTGCACGTATACTCCGCGTCTCCACAATGTTATTGAAGAAAGGGGTTGAGAGAGGTCTCACTCCTTATGACATTGGAAGCATCATGTGCAGGCAAAATTTCAAGCAAGAATCAGCGATTGAGAAGATTGTTTATGAGGCACAGGAATCATTGTTACCTGGCATGGAGGAATCTGCATTTCTTGAATCTGTCTCGAAGATCATGGATTCCTGGCTCGATAAGCTTTCAAAATAG 1704 0.4419 MSAADVALSPIRQESAHWLGPLSGESILIYLTVDGVMTPMRVLESDSISSVKMRIQTCTGVSGKKQKLVSNGRELARNDSLIKDYGVTSGNVVHLVLRLSDLIFIVVRTTTEKEVEFRVDRHRNVAYLKQHIKKKGKGSIDIENEEFFCDGEKLDDQKLFHDICKSDDDVIHLIVKKSSAQVKATPVQKDLELSVEAATAPCVDGENTNQATKIPPPGVDFLLEPVIVNPKINFFPFLWDMINSTFDGLKNKHNPIRSSEGTGGAYLMQDSSGMEYVSVFKPIDEEPMAVNNPQGLPLSSNGEGLKRGTKVGEGAVREVAAYVLDHPRAGPRLVSGEAVGFAGVPPTAMVRCLHEAFNHPDGYACSAKHVKMGSLQMYMNNDGNCEDIGPGAFPVEEVHKITLLDIRMANADRHAGNILFKKEAGGHISLIPIDHGYCLPEQFEDCTFDWLYWPQARQPYSADTVDYIRSLDAEKDIELLKYYGWDVPVECARILRVSTMLLKKGVERGLTPYDIGSIMCRQNFKQESAIEKIVYEAQESLLPGMEESAFLESVSKIMDSWLDKLSK* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g1515 567 SUPERFAMILY Ubiquitin-like 98 178 IPR029071 -
Ahy5g1515 567 ProSiteProfiles Ubiquitin domain profile. 29 98 IPR000626 GO:0005515
Ahy5g1515 567 Gene3D - 23 101 - -
Ahy5g1515 567 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 252 549 IPR000403 -
Ahy5g1515 567 SUPERFAMILY Protein kinase-like (PK-like) 409 565 IPR011009 -
Ahy5g1515 567 SMART ubq_7 103 176 IPR000626 GO:0005515
Ahy5g1515 567 SMART ubq_7 27 98 IPR000626 GO:0005515
Ahy5g1515 567 ProSiteProfiles Ubiquitin domain profile. 103 180 IPR000626 GO:0005515
Ahy5g1515 567 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 567 - -
Ahy5g1515 567 Gene3D - 104 192 - -
Ahy5g1515 567 Pfam Ubiquitin-2 like Rad60 SUMO-like 105 175 IPR022617 -
Ahy5g1515 567 CDD Ubl_ubiquitin_like 105 174 - -
Ahy5g1515 567 Pfam Phosphatidylinositol 3- and 4-kinase 261 514 IPR000403 -
Ahy5g1515 567 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 567 IPR044571 -
Ahy5g1515 567 Pfam Ubiquitin family 34 99 IPR000626 GO:0005515
Ahy5g1515 567 SUPERFAMILY Ubiquitin-like 32 100 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g1515 Ahy-Chr5 40293510 40296485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g1515 1 566 Acyl Lipid Metabolism Gene Families AT5G24240 54.530 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g1515 - - gmx:100787492 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy5g1515 5 40293510 40296485 Ahy13g2681 13 98947846 98950231 PCT
Ahy5g1515 5 40293510 40296485 Ahy3g2361 3 95087726 95089989 PCT