Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g0427 ATGAAAACGAGAACTCGAGAAGTGTGTGTCTGGAGTGGGAAGGAAAGAAGAAAAAAACTTTTAACAAAAACAATGGCGTCGGTACAACAAAGCACCTCTTCTGCTTCCTCTAAAAGGTGGCTTCCTCTCGAAGCTAATCCTGATGTCATGAACCAGTTCCTATGGGGGCTTGGGCTTCCACAGGATGAAGCAGAATGCTGTGATGTTTATGGCTTAGATGATCAGCTTCTCGAAATGGTTCCTAAGCCTGTTCTTGCTGTTCTTTTCCTTTATCCTATAACCACTCAGACTGAAGAAGAGAGGTTGCAACAGGAACATGAAAAAAGGGAATATAGCAGTAAAGTGTATTTTATGAAGCAAACTGTGGGTAATGCTTGTGGTACAGTAGGATTGCTTCATGCTCTTGGCAACCCCACGTCTGAGATTAAGCTTGTTGAGGGGTCATTCTTGGATAAGTTCTTTAAATCTACTGCAAGCATGGATCCAATGCAGCGTGCAAAATTCCTTGAGAATGATGGAGAAATGGAAGTTGCTCATTCAGTGGCAGCAAATGCTGGCGATACAGAGGCAGCAGATAATGCATATGCTCATTTTATCTGCTTTGCTTGTGTGGATGGTCAACTTTATGAGCTTGATGGAAGAAAGTCAGAGCCAATATCTCATGGTCCATCTTCGCCAAGTACTTTGTTGAAGGATGCAGCTAAAGTGATTAACAGCATGATCCAGAAAAATCCAGACTCCATCAACTTCAATGTCATTGCTGTCTCAAAGAAATCCAAGGATGGATTCTAA 792 0.4217 MKTRTREVCVWSGKERRKKLLTKTMASVQQSTSSASSKRWLPLEANPDVMNQFLWGLGLPQDEAECCDVYGLDDQLLEMVPKPVLAVLFLYPITTQTEEERLQQEHEKREYSSKVYFMKQTVGNACGTVGLLHALGNPTSEIKLVEGSFLDKFFKSTASMDPMQRAKFLENDGEMEVAHSVAANAGDTEAADNAYAHFICFACVDGQLYELDGRKSEPISHGPSSPSTLLKDAAKVINSMIQKNPDSINFNVIAVSKKSKDGF* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g0427 263 SUPERFAMILY Cysteine proteinases 38 257 IPR038765 -
Ahy5g0427 263 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 35 261 - -
Ahy5g0427 263 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 35 261 IPR001578 GO:0004843|GO:0006511
Ahy5g0427 263 CDD Peptidase_C12_UCH_L1_L3 40 254 - -
Ahy5g0427 263 Gene3D - 34 258 IPR036959 GO:0004843|GO:0006511
Ahy5g0427 263 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 40 241 IPR001578 GO:0004843|GO:0006511
Ahy5g0427 263 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 208 218 IPR001578 GO:0004843|GO:0006511
Ahy5g0427 263 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 192 203 IPR001578 GO:0004843|GO:0006511
Ahy5g0427 263 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 120 137 IPR001578 GO:0004843|GO:0006511
Ahy5g0427 263 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 80 92 IPR001578 GO:0004843|GO:0006511
Ahy5g0427 263 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 42 59 IPR001578 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g0427 Ahy-Chr5 4989097 4991573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g0427 K05609 - gmx:100527718 396.741