Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2406 ATGAGTCTTAGAAATATAATACCAACACCATCTCCAACAACACTTCCTTCATCCTACACTCTCAAACCCCGTTGTGTAAATTACATAACTACCCATAATAATCCATCATCATCTACTAAACCAACCACTTATAACAACTTAAGCCTTTCCAATGAAAACACTCATCAACAAGCCACATTACACTTAGAGAAAATGATCAATTTAGAAGACCACAATAGTTTATCTTCATCATCATTTGAATCAACACCATCAACATCTTCATTTGGCATTGGAACTTATCAAAATAAACTTGGTAAGAGATGGAAGGAGTACCAAGGAATGACCAATTGGGAGGGTTTGTTAGACCCGTTAGATGATAACCTACGTGCTGAAATCCTACGGTACGGTCACTTCGTTGAAGCTGCATACAAATCCTTTGAGTTTGATCCTTCTTCTCCAAACTATGCCAACTGTAGATTCCCAAAGACAACACTTTTTGAGCGTTGCGGTTTACCAAACACAGGGTACAAGGTAACCAAATACCTCCGTGCAACTTCGGGGATTCAGTTACCGAACTGGGTCGACAAAGCACCGAGTTGGGTGGCAACACAATCAAGCTACGTTGGTTATGTCGCAGTTTGTGACAACAAAGAAGAGATCAAAAGACTTGGTCGGCGTGACGTTGTTATTGCTTTTAGAGGAACAACCACATGTTTGGAATGGCTCGAGAATTTGCGTGCCACCCTCACCAACCTACCATGCAATCCCATGGACGGAGAAACTATGGGGTGTCATGGTAGTGGGGCCATGGTGGAAAGTGGTTTCTTGAGCCTCTACTCTTCCTCCATCCCCGACAACCCTTCTGCCCTCAGTCTGCAGCAGATGGTCAAACAGGAGATTGTCAGGATTCTCCAGGCTTATGCTGGAGAACCCTTAAGTTTGACCATCACTGGCCACAGTCTAGGGGCGGCATTAGCTACACTGGCAGCATATGATATTAATACCTCCTTCCCCAAATTGCCCGTGGTGACGGTCATTTCTTTTGGTGGGCCTCGAGTTGGCGACCGGAGGTTTCGACGGCAGTTAGAGAAGCAAGGGACAAAAGTTTTGCGGATAGTAAATTCCAAAGATGTTATCACCAAGGTTCCGGGTTTTGTGTTTGATGATGACATGGCAAAAGAAGGAGGTATCCATGTGGCAGGATTGCCGAGCTGGATACAGAAGAGGGTGGAGAAGGCGCAATGGGTGTACGCTGAGGTTGGAAAGGAGTTGCGCTTATGTAGCAGGGATTCTCCGTACCTCGGTAGTACAAATGTTGCCACGTGTCACGAGCTGAACACTTACTTACACCTTGTTGATGGGTTTGTGAGTTCTACGTGTCCTTTTAGGGCCACAGCAAAGAGATTTCTTCAGCGGTAA 1398 0.4521 MSLRNIIPTPSPTTLPSSYTLKPRCVNYITTHNNPSSSTKPTTYNNLSLSNENTHQQATLHLEKMINLEDHNSLSSSSFESTPSTSSFGIGTYQNKLGKRWKEYQGMTNWEGLLDPLDDNLRAEILRYGHFVEAAYKSFEFDPSSPNYANCRFPKTTLFERCGLPNTGYKVTKYLRATSGIQLPNWVDKAPSWVATQSSYVGYVAVCDNKEEIKRLGRRDVVIAFRGTTTCLEWLENLRATLTNLPCNPMDGETMGCHGSGAMVESGFLSLYSSSIPDNPSALSLQQMVKQEIVRILQAYAGEPLSLTITGHSLGAALATLAAYDINTSFPKLPVVTVISFGGPRVGDRRFRRQLEKQGTKVLRIVNSKDVITKVPGFVFDDDMAKEGGIHVAGLPSWIQKRVEKAQWVYAEVGKELRLCSRDSPYLGSTNVATCHELNTYLHLVDGFVSSTCPFRATAKRFLQR* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2406 465 Pfam Lipase (class 3) 222 378 IPR002921 GO:0006629
Ahy4g2406 465 SUPERFAMILY alpha/beta-Hydrolases 123 379 IPR029058 -
Ahy4g2406 465 Gene3D alpha/beta hydrolase 100 464 IPR029058 -
Ahy4g2406 465 PANTHER PHOSPHOLIPASE A(1) DAD1, CHLOROPLASTIC 63 464 - -
Ahy4g2406 465 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 63 464 - -
Ahy4g2406 465 CDD Lipase_3 170 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2406 Ahy-Chr4 121200472 121201869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2406 80 465 Acyl Lipid Metabolism Gene Families AT2G44810 68.394 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2406 K16818 - gmx:100800549 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2744 14 135475409 135476656 Ahy4g2406 4 121200472 121201869 hybridization
Ahy19g0718 19 9971860 9973387 Ahy4g2406 4 121200472 121201869 PCT
Ahy9g0589 9 8301765 8303296 Ahy4g2406 4 121200472 121201869 PCT