Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2099 ATGGCAGAAGAAAGTTCAAAGAGGTATGCAGTAGTGACAGGAGCAAACAAAGGGATAGGATTTGGAATATGTAAGCAATTGGCTTCTAATGGGATCACAGTGATCTTAACAGCAAGAGATGAGAAAAGGGGTCATGAAGCTCTTCAGAATCTCAAAGATTTAGGTCTATCTGGCCATGTTGTTTATCATCAGCTTGACGTCACTGATGCTAACAGCATAGCAGCCCTTGCAAATTTCATCAAAACCCAATTTGGAAAACTTGATATCTTGGTGAATAATGCAGGAGTCCCTGGGACAGTCGTTGATGGCGATGCATTCAAAGCTTTACTTGCTTCTGGGGAAAGGGCTGATGCTATTGATTGGAGAAAAATTGTATGTCAAGATTATGAATCTGCAGAAGCAGGAGTTAGAACTAACTATTATGGTGTCAAAGGAATGTGTGAAGCACTTATTCCCCTTCTACAATTGTCAGACTCACCAAAGATTGTCAATGTTTCCTCCTCCATGGGACAGTTGAAGAACCTACCAAATGAATGGGCTAAAGGAATTCTAAGTGATGATGAAAGCTTAACAGAAGAAAAGATTGATGAGGTTTTGAATCAATTTCTAAGTGATTTCAAAGAGGGTTCATTTGAAACCAAAGGATGGCCTTCTGCTTTTTCTGCATACATAGTTTCAAAAGCTGCTTTGAATGCATACACAAGAATTCTTGCAAAGAAGTATCCATCTTTCTGTATCAATTCTGTTTGTCCTGGTTTTGTCAAAACGGATATAAACTTCAACACTGGTAACCTTAGTGTTGACGAAGGTGCCGAGAGCGCTGTAAGGCTGGCTCTGCTATCTAATGGGGGTCAGTCCGGTCTCTTCTTCATCCGAAGTGAAGTTTCGCCATTTTGA 897 0.4036 MAEESSKRYAVVTGANKGIGFGICKQLASNGITVILTARDEKRGHEALQNLKDLGLSGHVVYHQLDVTDANSIAALANFIKTQFGKLDILVNNAGVPGTVVDGDAFKALLASGERADAIDWRKIVCQDYESAEAGVRTNYYGVKGMCEALIPLLQLSDSPKIVNVSSSMGQLKNLPNEWAKGILSDDESLTEEKIDEVLNQFLSDFKEGSFETKGWPSAFSAYIVSKAALNAYTRILAKKYPSFCINSVCPGFVKTDINFNTGNLSVDEGAESAVRLALLSNGGQSGLFFIRSEVSPF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2099 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE-RELATED 4 298 - -
Ahy4g2099 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 223 242 IPR002347 -
Ahy4g2099 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Ahy4g2099 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 IPR002347 -
Ahy4g2099 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 281 IPR036291 -
Ahy4g2099 298 Pfam short chain dehydrogenase 9 172 IPR002347 -
Ahy4g2099 298 CDD carb_red_PTCR-like_SDR_c 8 298 IPR045313 GO:0016616
Ahy4g2099 298 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 4 298 - -
Ahy4g2099 298 Gene3D - 1 298 - -
Ahy4g2099 298 PRINTS Glucose/ribitol dehydrogenase family signature 154 170 IPR002347 -
Ahy4g2099 298 PRINTS Glucose/ribitol dehydrogenase family signature 9 26 IPR002347 -
Ahy4g2099 298 PRINTS Glucose/ribitol dehydrogenase family signature 223 242 IPR002347 -
Ahy4g2099 298 PRINTS Glucose/ribitol dehydrogenase family signature 242 259 IPR002347 -
Ahy4g2099 298 PRINTS Glucose/ribitol dehydrogenase family signature 85 96 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2099 Ahy-Chr4 114934596 114936957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g2099 4 100 Acyl Lipid Metabolism Gene Families AT1G63380 34.343 1.42e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2099 K15095 - gmx:106797124 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2382 14 126638860 126641142 Ahy4g2099 4 114934596 114936957 hybridization
Ahy4g2099 4 114934596 114936957 Ahy12g0627 12 10140279 10144093 PCT
Ahy12g0628 12 10167951 10171253 Ahy4g2099 4 114934596 114936957 PCT