Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1867 ATGGTGAAGATGGGTACCAAAAAGTTGAGTTTTTTGCTGTGTGTTTGGGTTTTGGTATTTGGGTTTTGTTATGGTAGGTTTGTGGTGGAGAAGAACAGCTTGAAGGTGACTTATCCGAAATCGTTGAAGGGTAGTTATGAGTGTGCAATTGGGAATTTTGGAGTTCCAAAATATGGAGGAGTAATGGTTGGTTCTGTGGTGTACCCAAAGGCGAATCAGAAGGGTTGCAAGAGCTTCAGTGATGTTGATATTTCGTTTCAAACCAAGCCTGGAAGCTACCCCACCTTTGTTCTTGTTGATCGTGGTGATTGCTTCTTCACTTTGAAGGCATGGAATGCGCAGAATGCTGGAGCCGCAGCTATTCTTGTAGCTGATGACAGGTCGGAAACATTGATCACAATGGACACACCTGAAGAAATGAATGCTGGAAAAGGCGATTATGTCGAGAAGATTACTATTCCGTCTGCCCTCATCAGCAGATCACTTGCAGATAAAATCAAGGACGCTCTCTCAAATGGTGAGATGGTTAACATTAATCTTGATTGGACTGAGGCTCTTCCACATCCTGACGAGAGAGTCGAGTATGAGTTGTGGACAAATAGTAATGACGAGTGTGGGCCGAAATGTGACAATCTAATCGAGTTTCTGAAGGACTTTAAAGGTGCAGCACAGCTACTTGAGAGGAAAGGGTTTACTCAGTTCACCCCTCGCTATATAACTTGGTATTGTCCCGAAGCATTTCTTTTAACCAAGCAGTGCAAGTCACAGTGCATAAACCATGGAAGGTACTGTGCTCCGGATCCCGAGCAAGATTTCAGTAAAGGGTATGATGGCAAAGATGTTGTTATTCAAAATTTACGACAGGCTTGCTTCTATAAAGTGGCAAATGCAAGTGGAAACCCTTGGCAATGGTGGGACTATGTGACTGACTTTGCAATCCGTTGCCCGATGAAAGACAAGAAGTTCACTGAAGAGTGTTCAGATCAAGTTATAACATCTCTTGGTGCTAATCTGAAGAAGATTAAGGAGTGTGTTGGTGATCCTCATGCTGATGTTGAAAACCCTGTTCTCAAGGCTGAACAGGATGCACAGATCGGAAAAGGCTCTCGTGGTGATGTCACTATACTGCCTACTCTTGTTATAAATGACAGACAGTATCGAGGTAAGCTGTCAAGAGCAGCAGTTCTCAAGGCAATCTGTGCTGGTTTCCAAGAGACTACTGAACCGTCAATATGCTTAACTCAAGACATGGAAACAAATGAATGTTTGGAAAATAATGGTGGTTGCTGGCAAGACAAATCTGCTAACATTACTGCATGCCGGGACACTTTCCGAGGAAGAGTATGTGAATGCCCTATTGTACAAAATGTGAAATTTGTTGGTGATGGATATACACACTGTGAAGCTTCAGGAGCCTTGAGGTGCGCAATCAACAATGGAGGTTGCTGGAAGGGAACCCAAGAGGGCAAGGTTTACTCAGCTTGCATTGATGACCACACGAAAGGTTGCAAGTGTCCACCTGGGTTCAAAGGCGACGGTATCAACAAATGTGAAGATATTGATGAGTGTGAAGAAAAATTGAAGTGCCAATGCCCACAATGCAAATGCAAGAACACTTGGGGAAGTTATGAGTGTAAATGTGGTAGCGGTTTGTTCTACTCACAAGAGAATGATGTTTGCATGGGTAAGTACACTGCTTCAATGTCTGGTGGGAACTTTCTCGGAATGATCATCCTCGTTGCGGCTGTTGCTGGTGTTGCTGGATATGCATTTTACAAGATTAGAATCCAGAGATATATGGATTCTGAGATAAGGCAAATCATGGCTCAATACATGCCCTTGGACAATCAACCTGAGGTCCCCAGTCAACTCCATCATGATATCTAG 1887 0.4356 MVKMGTKKLSFLLCVWVLVFGFCYGRFVVEKNSLKVTYPKSLKGSYECAIGNFGVPKYGGVMVGSVVYPKANQKGCKSFSDVDISFQTKPGSYPTFVLVDRGDCFFTLKAWNAQNAGAAAILVADDRSETLITMDTPEEMNAGKGDYVEKITIPSALISRSLADKIKDALSNGEMVNINLDWTEALPHPDERVEYELWTNSNDECGPKCDNLIEFLKDFKGAAQLLERKGFTQFTPRYITWYCPEAFLLTKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVIQNLRQACFYKVANASGNPWQWWDYVTDFAIRCPMKDKKFTEECSDQVITSLGANLKKIKECVGDPHADVENPVLKAEQDAQIGKGSRGDVTILPTLVINDRQYRGKLSRAAVLKAICAGFQETTEPSICLTQDMETNECLENNGGCWQDKSANITACRDTFRGRVCECPIVQNVKFVGDGYTHCEASGALRCAINNGGCWKGTQEGKVYSACIDDHTKGCKCPPGFKGDGINKCEDIDECEEKLKCQCPQCKCKNTWGSYECKCGSGLFYSQENDVCMGKYTASMSGGNFLGMIILVAAVAGVAGYAFYKIRIQRYMDSEIRQIMAQYMPLDNQPEVPSQLHHDI* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1867 628 Gene3D Laminin 412 458 - -
Ahy4g1867 628 Gene3D - 24 189 - -
Ahy4g1867 628 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 13 607 - -
Ahy4g1867 628 SMART egfca_6 519 561 IPR001881 GO:0005509
Ahy4g1867 628 Pfam PA domain 64 166 IPR003137 -
Ahy4g1867 628 Gene3D Laminin 473 557 - -
Ahy4g1867 628 CDD PA_VSR 52 180 - -
Ahy4g1867 628 SUPERFAMILY PA domain 96 176 IPR046450 -
Ahy4g1867 628 CDD EGF_CA 519 550 - -
Ahy4g1867 628 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN, THIOREDOXIN-LIKE PROTEIN-RELATED 13 607 - -
Ahy4g1867 628 ProSitePatterns Calcium-binding EGF-like domain signature. 519 545 IPR018097 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1867 Ahy-Chr4 109229958 109235766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1867 2 628 Miscellaneous Gene Families AT3G52850 71.701 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1867 - - gmx:100806422 1065.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2141 14 119714557 119720340 Ahy4g1867 4 109229958 109235766 hybridization
Ahy4g1867 4 109229958 109235766 Ahy12g0611 12 9851422 9854878 PCT
Ahy4g1867 4 109229958 109235766 Ahy2g0512 2 7328854 7332332 PCT
Ahy12g0611 12 9851422 9854878 Ahy4g1867 4 109229958 109235766 PCT
Ahy2g0512 2 7328854 7332332 Ahy4g1867 4 109229958 109235766 PCT