Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1621 ATGATGAGACAGAAACAAGGAGAGGAAGCAATAGTGAGCAACATGAGCGAAGTAGAGAATGAAGAACAGAATAATGATCAACAAGAAAACCAGTCCATGTTCAGTGTTAAGAGCTTCCTTTGGCATGGTGGCTCTGTTTGGGATGCATGGTTCAGCTGTGCCTCTAACCAGGTGGCTCAAGTGCTGTTGACACTGCCATATTCATTCTCGCAATTGGGGATGGTATCAGGAATAGTGCTTCAGGTGTTCTACGGCATCATGGGAAGTTGGACTGCATATCTCATTAGTGTCCTTTATGTCGAATATCGCTCCAGAAAGGAAAAGGAAAACGTTAATTTCAAGAACCATGTCATTCAGTGGTTCGAAGTTCTTGATGGGTTGCTAGGCAAATATTGGAAAGCATTGGGGTTAGCCTTCAATTGTACTTTCCTCCTCTTTGGATCAGTGATACAGCTTATAGCATGTGCAAGTAACATATACTACATAAATGACAAATTGGACAAGAGGACTTGGACTTACATATTTGGAGCTTGTTGTGCTACCACTGTCTTCATTCCTTCTTTCCATAATTACCGTATTTGGTCTTTTCTTGGACTTGGAATGACCACTTACACCGCTTGGTATTTAGCTATTGCTGCTCTTGTTCATGGCCAGGTAGAAAATGTGACACATTCAGGTCCAACGAAGCTAGTACTGTACTTCACCGGAGCCACCAACATACTCTACACCTTTGGTGGACATGCAGTTACTGTAGAGATTATGCATGCGATGTGGAAGCCACAGAAGTTCAAGTACATATACTTGTTGGCTACATTGTATGTTTTCACATTAACGATTCCTTCAGCTGCTGCTGTTTATTGGGCTTTTGGTGATGAGCTTCTTAACCATTCCAATGCTTTCTCTCTTCTCCCAAAGAATGCTTTTCGTGATTCAGCTGTTATTCTCATGCTTATTCACCAGTTCATAACATTTGGATTTGCATGTACTCCATTGTACTTTGTGTGGGAGAAAGTAATTGGGATGCATGACACAAAGAGCATTTGTATGAGAGCACTAGCAAGGTTACCGGTGGTGATACCAATATGGTTCTTAGCCATAATATTCCCTTTCTTTGGTCCCATCAACTCTGCTGTTGGTGCTCTTCTTGTTAGCTTCACTGTCTACATTATCCCTTCCTTGGCTCATATGCTCACTTATAGAAAATCCTCTGCCAGACAGAATGCTGCAGAGAAGCCTCCTTTCTTCATGCCAAGCTGGACAGCAATGTATGTGATCAATGCATTTGTTGTGGTGTGGGTTTTGGTGGTTGGGTTTGGATTCGGAGGATGGGCCAGCATGACCAATTTCATCAAGCAAATTGACACGTTTGGGCTTTTCGCAAAGTGCTATCAGTGCAAGCCCCCGGTGGTCGCCGCCGCACCTCCGCCTCATTCTCATCCTCCTAGTCTTCATCATTGA 1458 0.4328 MMRQKQGEEAIVSNMSEVENEEQNNDQQENQSMFSVKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVLQVFYGIMGSWTAYLISVLYVEYRSRKEKENVNFKNHVIQWFEVLDGLLGKYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALVHGQVENVTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAAAVYWAFGDELLNHSNAFSLLPKNAFRDSAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICMRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRKSSARQNAAEKPPFFMPSWTAMYVINAFVVVWVLVVGFGFGGWASMTNFIKQIDTFGLFAKCYQCKPPVVAAAPPPHSHPPSLHH* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1621 485 Coils Coil 11 31 - -
Ahy4g1621 485 PANTHER AUXIN INFLUX TRANSPORTER 3 469 - -
Ahy4g1621 485 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
Ahy4g1621 485 PANTHER OS05G0424000 PROTEIN-RELATED 3 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1621 Ahy-Chr4 94651560 94660214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1621 4 465 Organic Solute Cotransporters AT2G21050 78.788 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1621 K13946 - tcc:18597575 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1825 14 103665529 103675370 Ahy4g1621 4 94651560 94660214 hybridization
Ahy4g1621 4 94651560 94660214 Ahy2g1723 2 88840595 88849694 PCT
Ahy2g1723 2 88840595 88849694 Ahy4g1621 4 94651560 94660214 PCT