Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1606 ATGGCCGCCACTTCTCTCTCTATAAATCCCTCTCTCTCCCCCAACTTTCGTTCATCGCCCTCCCCACCTTCTTCTTCAAATTCCGGTAAATTGCAACTCTTTCAGCCAATTGGAGCGAAACCGATTACTCTTTTCTGCAGGGGAGCGCGATTGTGCTCTCTGCAGAGTCCAAGGACATTCAAGAGTAGGAAAAGTGTGGTTCTTGGAGCTGGAAAAATGAGCATATCAGATCAAGAATTGCGTGAGGAGGAAGGAGAAGAGGGTCCTCCTTCTGAGAACAATTCAAGGCCTCGTCGAATTGCTCTCTTTGTTGAGCCTTCTCCTTTTGCATATGTCTCTGGATATAAAAATCGGTTCCAGAATTTTATTAAGCATCTCCGTGAAATGGGAGATGAGGTATTGGTTGTGACAACACATGAAGGAGTGCCCAAGGAATTTTATGGCGCTAAAATAATCGGATCCCGGAGTTTCCCCTGCCCATGGTATCAGAAGGTACCTCTCTCCTTGGCTCTCAGTCCAAGAATAATTTCAGCGGTCGCCCGGTTCAAGCCTGACATAATACATGCGTCGTCACCTGGCATAATGGTTTTCGGTGCTCTTATCATTGCAAAACTTCTCTCTGTTCCCATTGTCATGTCCTATCATACACATGTACCAGTTTACATTCCGAGATATACATTTAGCTGGCTGGTGAAACCCATGTGGTTGGTCATAAAATTTCTACATAGAGCAGCTGATCTCACTCTAGTTCCATCGGTTGCCATTGCGAGGGATCTCCTAGCAGCTAGAGTAACAGCAGCTAACAAGATTCGACTTTGGAACAAGGGTGTTGATTCTGACAGCTTCCATCCTCGATACCGCTCGCATGAAATGCGATTAAGATTGAGCAATGGTGAACTGGAGAAACCCTTGATAATTCATGTTGGACGGCTTGGAGTTGAGAAGAGTTTAGATTTTCTCAAAAGGATCATGGATAAGCTTCCTGAAGCACGAATTGCTTTTATTGGAGATGGGCCTTACAGGGAGGAGCTGGAGAAAATGTTTGAGGGTATGCCTGTAGTATTCACAGGAATGTTGGGAGGCGAAGAACTCTCCCAAGCATACGCTAGCGGAGATGTTTTCGTTATGCCTTCAGAGTCAGAGACACTTGGGCTTGTGGTTTTGGAGGCCATGTCTTCGGGGATTCCTGTGGTGGGAGCACGAGCCGGAGGAATTCCGGACATAATCCCTACAGATCAAGAGGGAAAAATTGGCTATCTCTACACTCCAGGCGATCTTGAAGACTGCATGAGCAAATTGGAGCCCTTGTTGCTTAACAGAGAGTTGAGGGAAACCATGGGAAAAGCTGCACGCCAAGAGATGGAGAAGTATGATTGGAGGGCAGCTACTCGAAAGATTCGCAACGAGCAGTACAGCGCTGCCATTTGGTTCTGGCGCAAGAAGAGAGCTCAACTGTTGAGACCCATTCAATGGGCCACAAAACGCATCTTCCCCTCTCCAGCAATCAACTATCGTTGA 1518 0.4677 MAATSLSINPSLSPNFRSSPSPPSSSNSGKLQLFQPIGAKPITLFCRGARLCSLQSPRTFKSRKSVVLGAGKMSISDQELREEEGEEGPPSENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIKHLREMGDEVLVVTTHEGVPKEFYGAKIIGSRSFPCPWYQKVPLSLALSPRIISAVARFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVKPMWLVIKFLHRAADLTLVPSVAIARDLLAARVTAANKIRLWNKGVDSDSFHPRYRSHEMRLRLSNGELEKPLIIHVGRLGVEKSLDFLKRIMDKLPEARIAFIGDGPYREELEKMFEGMPVVFTGMLGGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVGARAGGIPDIIPTDQEGKIGYLYTPGDLEDCMSKLEPLLLNRELRETMGKAARQEMEKYDWRAATRKIRNEQYSAAIWFWRKKRAQLLRPIQWATKRIFPSPAINYR* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1606 505 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 19 504 - -
Ahy4g1606 505 Pfam Glycosyltransferase Family 4 117 280 IPR028098 -
Ahy4g1606 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 467 - -
Ahy4g1606 505 Gene3D Glycogen Phosphorylase B; 113 461 - -
Ahy4g1606 505 MobiDBLite consensus disorder prediction 1 31 - -
Ahy4g1606 505 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 19 504 - -
Ahy4g1606 505 MobiDBLite consensus disorder prediction 76 98 - -
Ahy4g1606 505 Gene3D Glycogen Phosphorylase B; 277 457 - -
Ahy4g1606 505 CDD GT4-like 99 471 - -
Ahy4g1606 505 Pfam Glycosyl transferases group 1 301 452 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1606 Ahy-Chr4 93217267 93222302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1606 64 420 Glycosyltransferase AT5G01220 78.611 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1606 K06119 - gmx:100780899 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1810 14 102875597 102880082 Ahy4g1606 4 93217267 93222302 hybridization
Ahy4g1606 4 93217267 93222302 Ahy12g1988 12 102754018 102758745 PCT
Ahy4g1606 4 93217267 93222302 Ahy2g1711 2 88359131 88363733 PCT
Ahy12g1988 12 102754018 102758745 Ahy4g1606 4 93217267 93222302 PCT
Ahy2g1711 2 88359131 88363733 Ahy4g1606 4 93217267 93222302 PCT