Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1494 ATGGATAGTACTCGCACCCAACACCACCATCAGCATCCAAAGAAGAAGAAGAAGCACTGTGCCCCTTTGCTTACTCTTACAACAACGTCCACTAATCCAAACAACCCTTTCTCCATTCTTCTCTTCTATTTCGCCAAGTCCCTCCGAGCCTTGTGCTTCAACAGGATTCACTGCTGCACTCATGCTTTTGTCATAACCAACACTCTCATCTATGCTTCTTCTTCAATGGAGCCTGTGACCACCAATGAAGCTTCTCAGAAGGGAAACAAAGAGAGCTTTGCTCATTTGATTGAAGACACTGATAATAAGGCTCGTGAGAGCACAAGCACACCCTCTTCTTCTTCTTCTTCTTTAAGCTCAGAGTTCCTTTCATCTTCGACCAATGCCCATGATGTAGAAGAACAAGAAAAGAGTCCAAGTAGCACTGAGGAATCTTCATCTTCTTCGGTACCTTCAATGGGGTGGCCGGTTAAGGATATTGCTGCATTGAACTTGGAGAATCAAGATGGTAAGAACAAGAAGCGCTTGGGGAATGGGGAATTTGAGAAACAAGAATCAGTATCAGAGATTGAGATGATGAAGGAAAGGTTTGCAAAATTGTTACTTGGAGAAGATATGTCAGGTTGTGGCAATGGAGTCCCTACAGCATTGGCTATATCAAATGCCATAACTAATCTTTGTGCTACCTTGTTCGGGCAACTTTGGAGGCTAGAACCCCTGCGTCCCGAGAAGAAAGCAATGTGGCGAAGAGAGATGGAATGGCTTCTATCTGTTAGTGATCACATAGTTGAGCTGATTCCTACTTGGCAAACCTTTGCAGATGGAAACAAACTTGAGGTCATGACTTGTCGACCGCGCTCAGATCTTTATGTCAATCTTCCTGCCCTGCGTAAATTAGATAACATGCTTCTTGAAATTCTTGACAGTTTTGTCAACACAGAGTTTTGGTATGTAGACCAAGGCGTTCTATCCCCAGATGCAGACGGTGTATCTTCTTTTCGACAAGCCCTTCAGCGACAGGAGGAGAAATGGTGGCTTCCCGTGCCGAGAGTCCCTCCTTGTGGCCTTAATGATAATTCAAGGAAGCAGCTGCAGCACAAGCGTGATTGCTCGAACCAAATACTGAAAGCTGCAATGGCCATTAATAGCATTACTTTAGCCGAAATGGACATCCCTGAGTCTTATTTGGAAACTCTTCCAAAGAATGCTAGAGTCAGCTTGGGTGATGTGATTTATCGTTACATCACCTCAGATCATTTTTCTCCCGAGTGTTTGCTGGCATGCCTTGATTTAACTTCTGAGCATCAAGCCATAGAGATCGCGAACCGAGCGGAGGCTTCCATGTACATTTGGCGAAAAAGGATCAACACAAAGCCTTCCAATAACATCACTACCAGTGGCAGAACTAGTTCAAGAACATCATGGGAAATGGTCAAGGATCTGATGGTTGATGGAGACAAAAGGGAATTGTTCTCAGAGAGAGCAGAAAGCCTTCTGCTTTCTCTAAAGCAACGCTTCCCAGGCCTCCCTCAAACAGCCTTAGATATGAGCAAAATCCAATACAACAAGGTTTTTGTTAAAGATGTTGGCAAAGCCATTCTGGAGAGCTACTCTAGAGTGCTGGAGAGCTTGGCATTTAACATGGTAGCACGCATCGACGACGTGCTCTACGTAGATGACTTGACAAAACACTCTGGACAGTTCACATCTCACACAAAAGTTGGTGTAATTACTCACAAGAATGTTTCAGTGCCATGCTCAATGCCTGTCCCAGGCACCCCATACAAATCAGCCTTCGGCTCGCCAAGCCTCTCTCCAGCGCAAGGGATCAGTTCCGTAAGGGGAGGGAAATCGCCACTCCTTCCCAGCAGCAGCAGCAGCAATACCAACAGTCCTCATAGAAGAGTAGGGGTGAAGAAATCTTTGACTGATTTTCTTAGCATTGACACAAAAGGAAAAGCGTACCAGAGTTCAAATGAGAAAGTAGCAAGCGATGAAGTGGCAGCATTTGAAACAGATGTGGAGTCAAGTGATTTCACTGAAGAAGCAGTTAGCCCAAATACGCTGCAGAAGGCATGGTTAGAGTGA 2088 0.4507 MDSTRTQHHHQHPKKKKKHCAPLLTLTTTSTNPNNPFSILLFYFAKSLRALCFNRIHCCTHAFVITNTLIYASSSMEPVTTNEASQKGNKESFAHLIEDTDNKARESTSTPSSSSSSLSSEFLSSSTNAHDVEEQEKSPSSTEESSSSSVPSMGWPVKDIAALNLENQDGKNKKRLGNGEFEKQESVSEIEMMKERFAKLLLGEDMSGCGNGVPTALAISNAITNLCATLFGQLWRLEPLRPEKKAMWRREMEWLLSVSDHIVELIPTWQTFADGNKLEVMTCRPRSDLYVNLPALRKLDNMLLEILDSFVNTEFWYVDQGVLSPDADGVSSFRQALQRQEEKWWLPVPRVPPCGLNDNSRKQLQHKRDCSNQILKAAMAINSITLAEMDIPESYLETLPKNARVSLGDVIYRYITSDHFSPECLLACLDLTSEHQAIEIANRAEASMYIWRKRINTKPSNNITTSGRTSSRTSWEMVKDLMVDGDKRELFSERAESLLLSLKQRFPGLPQTALDMSKIQYNKVFVKDVGKAILESYSRVLESLAFNMVARIDDVLYVDDLTKHSGQFTSHTKVGVITHKNVSVPCSMPVPGTPYKSAFGSPSLSPAQGISSVRGGKSPLLPSSSSSNTNSPHRRVGVKKSLTDFLSIDTKGKAYQSSNEKVASDEVAAFETDVESSDFTEEAVSPNTLQKAWLE* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1494 695 MobiDBLite consensus disorder prediction 673 695 - -
Ahy4g1494 695 ProSiteProfiles PRONE domain profile. 180 569 IPR005512 GO:0005085
Ahy4g1494 695 Gene3D PRONE domain, subdomain 1 421 568 - -
Ahy4g1494 695 Gene3D PRONE domain, subdomain 1 181 420 - -
Ahy4g1494 695 MobiDBLite consensus disorder prediction 606 636 - -
Ahy4g1494 695 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 137 659 IPR038937 GO:0005085
Ahy4g1494 695 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 188 563 IPR005512 GO:0005085
Ahy4g1494 695 MobiDBLite consensus disorder prediction 606 637 - -
Ahy4g1494 695 MobiDBLite consensus disorder prediction 1 22 - -
Ahy4g1494 695 MobiDBLite consensus disorder prediction 106 129 - -
Ahy4g1494 695 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 7 137 659 - -
Ahy4g1494 695 MobiDBLite consensus disorder prediction 101 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1494 Ahy-Chr4 81478684 81482082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1494 - - gmx:100800673 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1678 14 92263526 92266705 Ahy4g1494 4 81478684 81482082 hybridization
Ahy4g1494 4 81478684 81482082 Ahy12g1859 12 99128737 99133057 PCT