Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1178 ATGCTGCCAGCAGAGTTCAACATGCCAAAGTCACAACTCCAATGCTATGGTGAAGAGGTATATTGTGCTGCTTGTGACATGCTAAGCAGATGCAACAATGGAGAAAGTCCAATTGATAGGTTCATATCAGTTGTAGCATGGAGCATTTCTACAAGACGCCCTGTCATTTTTGGAGTTGCTCCTTACAATCCCATTCTTGGAGAGACACACCATGTTTCCACACCAAATCTTAATGTCTTGCTAGAACAGGTTTCTCACCACCCTCCGGTGACTGCACTTCATGCAACAAATGAGAAGGAAAAGATAGAAACAATATGGTGTAGTTATGTTGTTCCAAAGTTCAATGGTGCCGCGGTGGAAGGTCAAGTGCATGGTAAAAGAGAACTGAAGCTCCACAATCATGGAGAGACATATGAAATGAATGCTCCTCATCTCATGATCAGGTTTCTTCCAGTTCCTAGCTGTGATTGGGTCGGCAATGTCCATATCCGGTGCCCGGAATCTGCCATTGAGGCAGAGTTATGCTACACAAGCCACACACTGTTCGGATTCCGGGCAAGCCGGAAATCAATAAAGGGGAAGATCATTGATTCAATATCAACAAAGATTCTGTATGAAATTAATGGTAATTGGGATAGTATTGTGACAGCGAAGGATACAAATAATGGAGAAGTGAGAGTGATATATGATGCAAAAGAAGTCATTTCAGGGCTCCAAACTCCTGTTGTGAAGGACTCTGAGTGTGTGTGGGGAAGTGAATCGGCAGTTGTATGGAGTGAAGTAAGCGAAGCAATCATGAAGAAAGAGTGGGAAAAAGCAACAGAAGCAAAGAAATGTGTGGAGGAAAGGCAAAGGGAGCTTTCAAGAGAAAGGATCACAAAAGGAGAAACATGGCTTCCTAAGCATTTCACACTCTCTCACTCCAAAGAAGGAGGCTGGAATTGTTTTCCAATTCAAAACTGGGTCCCACCCTCTCCTATTCAGACCTTGTAA 993 0.434 MLPAEFNMPKSQLQCYGEEVYCAACDMLSRCNNGESPIDRFISVVAWSISTRRPVIFGVAPYNPILGETHHVSTPNLNVLLEQVSHHPPVTALHATNEKEKIETIWCSYVVPKFNGAAVEGQVHGKRELKLHNHGETYEMNAPHLMIRFLPVPSCDWVGNVHIRCPESAIEAELCYTSHTLFGFRASRKSIKGKIIDSISTKILYEINGNWDSIVTAKDTNNGEVRVIYDAKEVISGLQTPVVKDSECVWGSESAVVWSEVSEAIMKKEWEKATEAKKCVEERQRELSRERITKGETWLPKHFTLSHSKEGGWNCFPIQNWVPPSPIQTL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1178 330 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 328 IPR000648 GO:0008289
Ahy4g1178 330 SUPERFAMILY Oxysterol-binding protein-like 2 315 IPR037239 -
Ahy4g1178 330 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 2 328 - -
Ahy4g1178 330 Pfam Oxysterol-binding protein 2 309 IPR000648 GO:0008289
Ahy4g1178 330 Gene3D - 251 320 - -
Ahy4g1178 330 ProSitePatterns Oxysterol-binding protein family signature. 82 92 IPR018494 -
Ahy4g1178 330 Gene3D - 66 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1178 Ahy-Chr4 31161319 31171876 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1178 K22285 - gmx:100780927 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1267 14 28970697 28984655 Ahy4g1178 4 31161319 31171876 hybridization
Ahy1g1904 1 95687569 95691029 Ahy4g1178 4 31161319 31171876 PCT
Ahy4g1178 4 31161319 31171876 Ahy1g1904 1 95687569 95691029 PCT