Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1170 ATGGCACTTGTACAAGAAACTTTGATTCTTGTGTTACTAACCTTCTCAACCTGGTGTTTCTCAACATCAATCAGCACCAATTCTTCAACAACCACATCCTTGGCTAAATTACCAAATGCTACAACTGCAAAGCCTAAAAGATTGGTCACCAAACTCATTCATCAAAGATCTGTTCACCATCCACACTACAACCAAAGTGAAACAGCCAAGGAAAGGATCGAACTCGACATCCAACATTCCATTGCACGTGTCACGTATTTGCATGCGAGGATTGAAGGAACTATGGCTGCCAACGACCATAGGACTCAACTTTCTCCCTCCTCGTCTGGTAGAACGATAATGGCAAATATCTCGGTAGGCCAACCTCCCACCCCACAGCTAGTTGTCATGGACACTGCCAGCGAAATCTTCTGGATTATGTGCAACCCTTGCTCGAATTGTGATCAGCATTTAGGTCAACTTTTTGACCCTTCAAAGTCTTCCACCTACACCCAATTATGCAGGACACCTTGCGGCTTTCGAGGCTGCAATTGTCACCCCTTGGATAGGTCGCCATTCAGTATCACTTATGCAGACCATTCCTCTGCATCGGGAACCCTTGCCTATGAAACGTTAGTCTTTGAGACATCTGACGAAGGTTCCATTCAAATACCAAATATAGAATTCGGGTGTGGCCGCGACATTGTGTACAATAATGATCCAGGGTATAATGGAATATTAGGACTAAACAATGCACCTATGTCTTTGGCATCACAAATAGGCCATAAATTCTCTTACTGCATAGGAAGCCTAGCTGACAAAAGTAGTAATTACAACCAACTGATCCTAGGCGAAGGAGCAGATCTTGAAGGCTATCCAACCCATTTTCAAGCTCTTCGTGGCATGTATTATATCACCATGGAAGGCATAAGTATAGGAGAAAAGAGGCTTGACATTGCTCCTGCAACTTTTGAGATAAAAGAGAATGGTGCGGGTGGTGTCATCATTGACACAGGATCTACGCTCACCTACCTACCTGATGATGTGCAAAATTTACTATACAAGGAAGTTAGGAATATCCTCGGCGGGTCCTTTAGGAAAGTTATAATCGAAACTTATCCCTGGCTATATTGCTATTTGGGGGTTGTGAGTAGAGATTTAGTTGGATTTCCAGTGGTTACATTCCATTTTGCTCAAGGTGCAGACTTGGCTTTGGACACAGGAAGCTTCTTTGAACAGCTCACAGACAGCGTATTTTGCATGGCTATAGGTCCAGTCAGTGCCACTGGCCTCGACAACCGATCTTCTGTTATCGGCTTATTGGCTCAGCAGAGTTACAATGTCGGATATGACCTTGTTAACCAGATTGTTTACTTTCAAAGAATTGATTGTCAACTGCTTAGTGGCTGA 1389 0.4363 MALVQETLILVLLTFSTWCFSTSISTNSSTTTSLAKLPNATTAKPKRLVTKLIHQRSVHHPHYNQSETAKERIELDIQHSIARVTYLHARIEGTMAANDHRTQLSPSSSGRTIMANISVGQPPTPQLVVMDTASEIFWIMCNPCSNCDQHLGQLFDPSKSSTYTQLCRTPCGFRGCNCHPLDRSPFSITYADHSSASGTLAYETLVFETSDEGSIQIPNIEFGCGRDIVYNNDPGYNGILGLNNAPMSLASQIGHKFSYCIGSLADKSSNYNQLILGEGADLEGYPTHFQALRGMYYITMEGISIGEKRLDIAPATFEIKENGAGGVIIDTGSTLTYLPDDVQNLLYKEVRNILGGSFRKVIIETYPWLYCYLGVVSRDLVGFPVVTFHFAQGADLALDTGSFFEQLTDSVFCMAIGPVSATGLDNRSSVIGLLAQQSYNVGYDLVNQIVYFQRIDCQLLSG* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1170 462 Pfam Xylanase inhibitor C-terminal 296 453 IPR032799 -
Ahy4g1170 462 PANTHER OS07G0603500 PROTEIN-RELATED 37 459 - -
Ahy4g1170 462 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 327 338 IPR001969 GO:0004190|GO:0006508
Ahy4g1170 462 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 37 459 - -
Ahy4g1170 462 Gene3D Acid Proteases 284 460 IPR021109 -
Ahy4g1170 462 ProSiteProfiles Peptidase family A1 domain profile. 113 453 IPR033121 -
Ahy4g1170 462 Gene3D Acid Proteases 94 277 IPR021109 -
Ahy4g1170 462 SUPERFAMILY Acid proteases 114 457 IPR021109 -
Ahy4g1170 462 Pfam Xylanase inhibitor N-terminal 115 277 IPR032861 -
Ahy4g1170 462 CDD pepsin_A_like_plant 114 457 IPR034161 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1170 Ahy-Chr4 30872540 30873928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1170 117 460 Miscellaneous Gene Families AT1G44130 23.936 4.57e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1170 - - lang:109327872 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1261 14 28794963 28796419 Ahy4g1170 4 30872540 30873928 hybridization