Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1033 ATGGTGCTTCCTCACTTTCTTCCCTTCTTCTTCCTACTTCTTGTTGTTGATGGCAGGTTCGTGGTGGAGAAGAGCAGCATCACGGTGCTGTCTCCGCACACCATGAAGGCCAAGCACGACGGCGCCATAGGAAACTTCGGTGTTCCTAACTACGGAGGATTCATAGTGGGATCCGTACACTACCCTGACAAAGACTCTCATGGTTGTAAGCCTTTTGAAGGTGATAAGCCTTTCAAGATTCACTCTTATCGCCCCACTATTCTTCTCCTTGATCGTGGAGAGTGTTACTTTGCGTTGAAGGTATGGCATGCTCAAATAGCTGGAGCTGCAGCAGTGTTAGTAACTGACAGCATTGATGAGACCCTAATAACCATGGATTCTCCAGAAGAGAGTAACGATGCAGATGGATACATAGAGAAGATTCAGATCCCCTCGGCGCTGATCGAGAAATCTTTCGGCGACGAGCTGAAGCAAGCACTGAGCAAGAAAGACGAAGTGATGCTTAGAATTGACTGGAGAGAATCAGTGCCTCACCCAGACAACAGAGTGGAGTATGAGCTATGGACTAACAGCAACGACGAGTGTGGCGCTCGCTGCGAAGAGCAGATGAATTTCGTCAAGAATTTCAAAGGACATGCTCAGATTCTTGAGAGGGGAGGCTACACATTGTTCACTCCTCACTACATAACCTGGTTTTGTCCCAAGCCGTTTGTAGAGAGCAGACAGTGCAAATCTCAGTGTATAAATCATGGAAGGTATTGTGCGCCGGATCCCGAGAAGGATTTTGGAGAAGGATATGAAGGGAAGGATGTGGTGTATGAAAACTTGAGGCAGTTGTGCGTTCATAGAGTTGCCAATGAGAGTAACCGTTCTTGGGTTTGGTGGGATTATGTAACAGATTTCCATATCAGGTGTTCTATGAAGGAGAAAAAATACACCAAACAATGTGCTGAAGATGTCATGAAATCATTAGATTTGCCTATAGAGAAAATTAAAAAGTGCATGGGTGACCCCGAAGCTGATGTGGAGAATGAGGTGCTAAAGAATGAGCAACTACGCCAGATAGGGCATGGATCTCGTGGCGATGTCACCATCTTGCCAACTTTGGTTATAAACGATGTCCAGTATCGAGGAAAATTGGAGAGATCTGCTGTTCTGAAAGCTGTATGTGCTGGATTCGAGGAGACTACTGAACCTCCAGTTTGTTTAAGTGGAGATATTGAGACTAATGAGTGCCTTGAAAGAAATGGAGGATGTTGGAAGGATGAGAGGGCCAACATAAGTGCTTGCAGAGATACTTTTAGGGGAAGAGTTTGTGAGTGCCCTGTTGTGAAAGGTGTCCAGTATAAGGGTGATGGTTATACATCATGTGAAGCTTTTGGACCTGCAAGGTGTTCAATAAACAATGGAGGTTGTTGGTCAGAAACTAAAAACAAATTAACTTTCTCAGCTTGCTCAGAATTTATAGTAAATGGTTGTCGTTGCCCAGTTGGATTCCATGGGGATGGATACAAATGTGAAGATGTTGATGAATGCAAGGACCGAAGCGCTTGTCAGTGTGATGGCTGCACCTGCAAGAATACATGGGGTAGCTATGATTGCAAATGCAAAGGAAATCTTCTTTACATGAGGGAACAAGATGTTTGTATTGAAAGAAGTGGATCAAGATTTGGGCGGTTCCTCGCATTTTTGGTGATAGCAGTTGTTGCAGCTGCCGGTTTAGCCGGTTATGTATTCTACAAATACAGACTCAGGGCTTACATGGACTCGGAAATCATGGCTATCATGTCCCAGTACATGCCACTAGACCAGCAAAATAATGTAGCTCATGCCGAAACTGAACCTTTACGGTCACAAGGCACTGTATAA 1869 0.4478 MVLPHFLPFFFLLLVVDGRFVVEKSSITVLSPHTMKAKHDGAIGNFGVPNYGGFIVGSVHYPDKDSHGCKPFEGDKPFKIHSYRPTILLLDRGECYFALKVWHAQIAGAAAVLVTDSIDETLITMDSPEESNDADGYIEKIQIPSALIEKSFGDELKQALSKKDEVMLRIDWRESVPHPDNRVEYELWTNSNDECGARCEEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPKPFVESRQCKSQCINHGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHIRCSMKEKKYTKQCAEDVMKSLDLPIEKIKKCMGDPEADVENEVLKNEQLRQIGHGSRGDVTILPTLVINDVQYRGKLERSAVLKAVCAGFEETTEPPVCLSGDIETNECLERNGGCWKDERANISACRDTFRGRVCECPVVKGVQYKGDGYTSCEAFGPARCSINNGGCWSETKNKLTFSACSEFIVNGCRCPVGFHGDGYKCEDVDECKDRSACQCDGCTCKNTWGSYDCKCKGNLLYMREQDVCIERSGSRFGRFLAFLVIAVVAAAGLAGYVFYKYRLRAYMDSEIMAIMSQYMPLDQQNNVAHAETEPLRSQGTV* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1033 622 SUPERFAMILY PA domain 85 176 IPR046450 -
Ahy4g1033 622 Gene3D - 17 179 - -
Ahy4g1033 622 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 5 598 - -
Ahy4g1033 622 Pfam PA domain 57 156 IPR003137 -
Ahy4g1033 622 SMART egfca_6 508 550 IPR001881 GO:0005509
Ahy4g1033 622 Gene3D Laminin 464 550 - -
Ahy4g1033 622 ProSitePatterns Calcium-binding EGF-like domain signature. 508 534 IPR018097 GO:0005509
Ahy4g1033 622 Gene3D Laminin 402 458 - -
Ahy4g1033 622 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 5 598 - -
Ahy4g1033 622 CDD EGF_CA 508 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1033 Ahy-Chr4 21161096 21166718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1033 2 619 Miscellaneous Gene Families AT1G30900 71.359 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1033 - - aip:107639095 1276.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1128 14 21486456 21492045 Ahy4g1033 4 21161096 21166718 hybridization