Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1006 ATGGCTGCTTTGTATTCCAGTGTCACAGAGGAGGATCTGAACGGTTTTAGGTTCTCAATCGATCAAATTCAAACCCAAGTTGTCAAGCTAGAGAAACAAGTAAATGAAGTTGAACAGTTCTACCAATCCAACGATTTTAAAGTTAATAATTCCAAAAACAAGGGTGAAAATAAGCATCTTATTGGAACTAAGAAGTCACTGCAAGGTGATTCACACAATGAAGCTGATGCTGATGCTGCAAAAGGAAGGGAAGAACTCATGCGCCAGTTTTCCGTTATATTGAGTCAGATTACTCAGCATGAATGGGCTTGGCCTTTTATGGATCCAGTAGATGTTGAAGGTCTGGGACTGCATGACTATTATGAGGTTATCAATAAGCCTATGGATTTCAGCACAATAAAAAGAAAAATGGAAGCTAAGGATGGCTCTGGTTATAAGAATGTCAGGGAGATATATTCTGATGTAAGGTTGATTTTTAAGAATGCAATGAAATACAATGATAAAAAGAATGAAGTCCATGTTATGGCGAGAACCTTGCTGAACAAGTTCGAAGAGAAATGGCTGCTTCTGTTGCCTAAAGTTGACCAAGAGGAGAGGAGACATTTGAAGGAAGAAGCAGATGCACAGTTGGAAACACAGCTTGCACAAGAAGCAACTTATGCCAATATGACTAGGGATTTATCTGTTGAGCTGGACAAGGTTGATGTGCATTTGAAGAGTCTTAAAGCATTGGTTATTCAAAACTGCAGGAAACTCTCATCTCAGGAGAAAGTTCTACTTGGGACAGCTCTCCCAAGGTTGTCTCCTGAATACCTCATCAGAGCATTGCAAATAGTTCATGAAAACAATCCAAACTTCCAACCTAATGCTGAAGTTGTGGAACTTGACATTAATTCTCAGAACGACTACACACTGTGGAGGTTAAACGTTTTTGTCAAGCATGCATTGAAAGTTCAGGGAAGAACTGCTGAAGGCACAGGTGTTGACCATAGTAATAAAACCGAGAACAAGAACTACTCCAAAAGGAGGAGAGTTTTGTGA 1041 0.3967 MAALYSSVTEEDLNGFRFSIDQIQTQVVKLEKQVNEVEQFYQSNDFKVNNSKNKGENKHLIGTKKSLQGDSHNEADADAAKGREELMRQFSVILSQITQHEWAWPFMDPVDVEGLGLHDYYEVINKPMDFSTIKRKMEAKDGSGYKNVREIYSDVRLIFKNAMKYNDKKNEVHVMARTLLNKFEEKWLLLLPKVDQEERRHLKEEADAQLETQLAQEATYANMTRDLSVELDKVDVHLKSLKALVIQNCRKLSSQEKVLLGTALPRLSPEYLIRALQIVHENNPNFQPNAEVVELDINSQNDYTLWRLNVFVKHALKVQGRTAEGTGVDHSNKTENKNYSKRRRVL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1006 346 MobiDBLite consensus disorder prediction 322 346 - -
Ahy4g1006 346 SUPERFAMILY Bromodomain 81 195 IPR036427 GO:0005515
Ahy4g1006 346 Pfam Bromodomain 93 177 IPR001487 GO:0005515
Ahy4g1006 346 MobiDBLite consensus disorder prediction 328 346 - -
Ahy4g1006 346 ProSiteProfiles Bromodomain profile. 98 173 IPR001487 GO:0005515
Ahy4g1006 346 Coils Coil 20 40 - -
Ahy4g1006 346 PANTHER OSJNBA0053K19.4 PROTEIN 6 343 - -
Ahy4g1006 346 ProSiteProfiles NET domain profile. 242 323 IPR027353 -
Ahy4g1006 346 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 6 343 IPR017413 GO:0005634|GO:0006355
Ahy4g1006 346 Gene3D - 246 322 IPR038336 -
Ahy4g1006 346 Gene3D - 44 212 IPR036427 GO:0005515
Ahy4g1006 346 SMART bromo_6 79 192 IPR001487 GO:0005515
Ahy4g1006 346 Pfam Bromodomain extra-terminal - transcription regulation 252 313 IPR027353 -
Ahy4g1006 346 PRINTS Bromodomain signature 101 114 IPR001487 GO:0005515
Ahy4g1006 346 PRINTS Bromodomain signature 154 173 IPR001487 GO:0005515
Ahy4g1006 346 PRINTS Bromodomain signature 117 133 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1006 Ahy-Chr4 20170996 20174862 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1006 - - gmx:100818490 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1098 14 20319840 20324354 Ahy4g1006 4 20170996 20174862 hybridization