Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0955 ATGATAGACCTCAAGTACATTTGGGTTCTTGTTTCAATCAACAGATACATTCATGAAACCTTGTCAAATGAGAGAACAAGGAATGCTCTAAAGCTGAAATGCACCTCAAAACTAAGGATTCAAAAGCAAGAGTTCTTTGAATTCTCTGAGCAATCAGTGCTATCAAATTTGTACTGGGGAATTGACAGCATTGAAGCTGCAATTCAAGCTCAGAAGCCAGAGGAAAAGTCCTTCAGGCTCATGAACTCAGAACAAATGCTTCAGGTACCAGCAATGCTTGATGAGGAAGAAGTAACCGCCACGGTTTCAAACCGTTACTTGGTGTGCTGCTCCTATTTTTACCTCTCAGTTGTTAGGAACCTGCAGGGTGATGAGTGGCAATCTGCACTGCATTTTCTTCAAGCTGTGTTGGTGTCACCAAGGATTGTTTGCAATGAATTTGCAACTGAACTCTCTCAGAGCCTTTTCCCTCAAGAAACCATCATGTTGCTGAGAAGGAAGAAGCAGAATGTGAAGAACAACAGTGGAAGCATGAGTTCTAGTTCTGAGGATGAAGTGAATGAAGCAATTAGGGATATTGCAAGAAGTTATAAGGAAGGTTTGGTGTATTATCAGGTTATGCTTTATGGAGAGAATCCATGGTGGAGAAGTTATTGCAGCACCAAACACCAATCACCACAATATGTGGATGCACCAAATACCAGCTGTGTTTCTCCTAATTCATTTCAACATGAACCAAGATTGAAAACCTGCAATATGTATGATAAAGTTCATCCACTTGGTCCCCAAGATGTGATGCATAATATGGAAGACAGAAAATTTCACATAAGAGCCAAAATAACAAAAGCAAATGATCTACAGAGAGAAACTTATGACAGGAAGCTACATCAATCCTATGCCTTGGATCATGCTGTGAAATATTCCGGGCAAGAACAGCTGAATGAAAGAAGTGTGGTTAATTTTGATTCGACCATATTCAACAGAGCCAGGGAAGATTCTACTTTATCCATCTCAAATTTCCATGTAGATGATGGAATAATTGAGGAAGCATTGCAGCCACTAAAATTCCATCTCTTTGACAATGTAACATCTAAATCTCCTTCCAAACATTGGCTCAGCCAGAAAGATCATGAAGAAAGTTCTAAAACAAAATCACGAAGATATTCCCTACAGGATCTTTCAGGAGTGATTCAAAGAATCTCAGAACTGCATTATTCAGAAGCATTAGGAAAGTGTGGACAAGAATATACGGTTGACATTGCATCTATCTATGAGTATTTGACCGATTCATCAGGCGCTAGTTATGCTTCCTTGAGGGATGCCATCTTGGATGAACTGCTAGTAGCTATCTCAACATCCAAAGAGGAAAGAGAAATTAGAGCTTCTGTGTCTATTCTCACTACAATAATTTCAAGAAACAAATCAGTCATAGAAGACATCAAGAAGAAAGGTTTAAAGTTGTGTGATCTTGCTAGTGCTCTAAAACAAAATGTTCATGAGGCTGCAATTCTCATCTATTTGATAAATCCATCACCTATAGACATAAAAACATTGGAACTTCTACCAATACTTGTTGAGATTGTATGCACCTCACATAGTTACAAGAATAAGCCAGAGCCCCTTCTTCTGACGCCTCATGCAGCATCATTGATGATCATTGAAGAACTAGTGACTTCGTTCGACTATGCAACAAATAACATGCATTTGGCTGCGATCAGTTCCCCTCATGTTCTCAGTGGACTTCTAGAAGTTGCTAGGAATGATAATCTAGAAGAGTTTTTCTCTTTAACCACCATTCTTATAAAATGCATGCAGTTTGATGCACAATGTAGACAGTATGTATCACAATACACTCCTCTTGCTCCTTTTATCCATCTTCTGCAGACGGAAAATACCCGCGCCAAATGCATGGCACTTGAATTTTTCCATGAAATCCTTTGCATACCGCGATCATCAGCCATTAATCTGTTGCAGCGTATACAGAAAGAAGGAGGCATCAATGTTATGCAGATACTAAGGATTTGTACTCATCAATTACAACCTGATCACCAGCTTTTTGCAGCAAACATACTACTTCAGTTAGAAACATTGAACCCATGTGATAAAAGCTTGTTCAGAGTAGAAGCAGTGAAGGTCCTTCTAAGGGCATTGGTATCTCAGGAAAGCTCAGAGCAGATATTATCTGCATCCATTTTATCAAATCTTGCAGGAACATATGCGTGGACAGGAGAACCATATACAGCTGCATGGTTGCTGAGGAAGACAGGATTGAACTCTCCCTATCACCACAATATGATAAGAAACTTCAACTGGTTGGATCAGAGTCTACAGGATACTGGCACAGACTTATGGTGCAGTAAAATTGCAAAATCTATGTTAAGTGTTGGAGATTCCATCTTCCATGCTTTAGAGAGTGGATTAAGAAGCAAGATGAAAATGGTCTCTAGAGATTGCCTTGTAGCAATTTCATGGCTCGGATGTCAAATATCTAAAAGCTCGGATAGCCTCAGATATTCGGCATCCGAGATCATACTGAGTGGAATCGAGCAATTCCTGCATCCTGGGATGGAGCTAGAAGAAAGACTTCTAGCATGTCTATGCATTTATAATTATGCCACTGGAAAGCAGAAACTGATTCATTTCTCTGAAGGAGTAAAAGAATCGTTACGACGTCTTTCAAATGTAACTTGGATGGCTGAGGAATTACACAAAGTAGCTGATTTCCTGTTGCCAAACATATCACGTATTTCTTGTGTTCACACACAAATCCTTGAGACGAGTCGAAACTTCAATGTAGCAGTTTGCTCCCTCATATACTACAAGGGACTCCTATTCAGTGGATATTCAGATGGTTCAATCAAGGTGTGGGATATTAGAGGGCACTCAGCTAGTCTTGTATGGGACATTAAGGAGCACAAGAAGTCCGTGACATGCTTTTCGCTATCTGAACCATCAGATAGCCTCTTAAGTGGATCCGCTGATGGAACCATAAGGGTGTGGAGAATGGTCCAGAGAAAGTTGGAATGTGTTGAAGTAATAGTCTTCAAGGAACCAATCCATCAGTTACATGCATCGGGTGAAACAATTTTCGCGATTACTGAAAGCCAAGGAATAAAGATAGCTAATGATTCAAGGGCAATCAGAAATATTTTCAAAGGTAAGCATGTAAAATGCATGACACTAACTAGAGGAAAGTTATACATTGGCTGCACAGATTCAAGCATACAGGAGTATTCCACAACATACAACAGGGAACAAGAAATCAAACCACCAACAAGGAGTTGGATCAAGCAAAGTAAGCCAATACATTCAATTGTAGCATACAGAGATTGGCTCTATAGTGCAAGTAAGCATGTTGAAGGCACAACATTCAAGGAATGGAAGAAAAAAATTGGGAAACCCAAAATTTCAATCCATTCTGACAAAGGAGATAGTATGATGGCTATGGAAGTGGTAGAAGACTTCATATACCTAATCTCCAGCTCATCTGCAAATAGCATTCAGATCTGGTTGAGAGGGACACCGAAAAAACTTGGGAGAATATCGGCCGGAAGCAAGATTACAAGCCTTCTCGCCGCAAATGACATTATTCTTTGTGGTACTGAGATGGGACAAATCAAGGGATGGATCCCTTTGTAG 3639 0.399 MIDLKYIWVLVSINRYIHETLSNERTRNALKLKCTSKLRIQKQEFFEFSEQSVLSNLYWGIDSIEAAIQAQKPEEKSFRLMNSEQMLQVPAMLDEEEVTATVSNRYLVCCSYFYLSVVRNLQGDEWQSALHFLQAVLVSPRIVCNEFATELSQSLFPQETIMLLRRKKQNVKNNSGSMSSSSEDEVNEAIRDIARSYKEGLVYYQVMLYGENPWWRSYCSTKHQSPQYVDAPNTSCVSPNSFQHEPRLKTCNMYDKVHPLGPQDVMHNMEDRKFHIRAKITKANDLQRETYDRKLHQSYALDHAVKYSGQEQLNERSVVNFDSTIFNRAREDSTLSISNFHVDDGIIEEALQPLKFHLFDNVTSKSPSKHWLSQKDHEESSKTKSRRYSLQDLSGVIQRISELHYSEALGKCGQEYTVDIASIYEYLTDSSGASYASLRDAILDELLVAISTSKEEREIRASVSILTTIISRNKSVIEDIKKKGLKLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCTSHSYKNKPEPLLLTPHAASLMIIEELVTSFDYATNNMHLAAISSPHVLSGLLEVARNDNLEEFFSLTTILIKCMQFDAQCRQYVSQYTPLAPFIHLLQTENTRAKCMALEFFHEILCIPRSSAINLLQRIQKEGGINVMQILRICTHQLQPDHQLFAANILLQLETLNPCDKSLFRVEAVKVLLRALVSQESSEQILSASILSNLAGTYAWTGEPYTAAWLLRKTGLNSPYHHNMIRNFNWLDQSLQDTGTDLWCSKIAKSMLSVGDSIFHALESGLRSKMKMVSRDCLVAISWLGCQISKSSDSLRYSASEIILSGIEQFLHPGMELEERLLACLCIYNYATGKQKLIHFSEGVKESLRRLSNVTWMAEELHKVADFLLPNISRISCVHTQILETSRNFNVAVCSLIYYKGLLFSGYSDGSIKVWDIRGHSASLVWDIKEHKKSVTCFSLSEPSDSLLSGSADGTIRVWRMVQRKLECVEVIVFKEPIHQLHASGETIFAITESQGIKIANDSRAIRNIFKGKHVKCMTLTRGKLYIGCTDSSIQEYSTTYNREQEIKPPTRSWIKQSKPIHSIVAYRDWLYSASKHVEGTTFKEWKKKIGKPKISIHSDKGDSMMAMEVVEDFIYLISSSSANSIQIWLRGTPKKLGRISAGSKITSLLAANDIILCGTEMGQIKGWIPL* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0955 1212 MobiDBLite consensus disorder prediction 370 386 - -
Ahy4g0955 1212 PANTHER OS04G0584500 PROTEIN 7 267 - -
Ahy4g0955 1212 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 969 1002 - -
Ahy4g0955 1212 MobiDBLite consensus disorder prediction 364 386 - -
Ahy4g0955 1212 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 303 1212 - -
Ahy4g0955 1212 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 7 267 - -
Ahy4g0955 1212 ProSiteProfiles Trp-Asp (WD) repeats profile. 943 966 IPR001680 GO:0005515
Ahy4g0955 1212 ProSiteProfiles Trp-Asp (WD) repeats profile. 969 1002 IPR001680 GO:0005515
Ahy4g0955 1212 SMART WD40_4 1131 1171 IPR001680 GO:0005515
Ahy4g0955 1212 SMART WD40_4 920 957 IPR001680 GO:0005515
Ahy4g0955 1212 SMART WD40_4 962 1001 IPR001680 GO:0005515
Ahy4g0955 1212 PANTHER OS04G0584500 PROTEIN 303 1212 - -
Ahy4g0955 1212 Gene3D - 420 905 IPR011989 -
Ahy4g0955 1212 Pfam WD domain, G-beta repeat 967 1000 IPR001680 GO:0005515
Ahy4g0955 1212 Gene3D - 911 1211 IPR015943 GO:0005515
Ahy4g0955 1212 SUPERFAMILY WD40 repeat-like 939 1209 IPR036322 GO:0005515
Ahy4g0955 1212 SUPERFAMILY ARM repeat 572 880 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0955 Ahy-Chr4 18033246 18041136 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0955 - - gmx:100789287 1820.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1052 14 18288257 18296116 Ahy4g0955 4 18033246 18041136 hybridization