Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0951 ATGTCCCTAATCTCAGGCCATCATGTTTTACATGATCAACCTTTGTGCTTAAAAAATGTTTCCATTACAATTCAACTTCATAAACATTTTGGCAAAATAGAACCTTACAATTTGTATTCTCTATTGGAAATGTTGACACAGCATGTCAGCACTATCATTGATCTTATTTTCCCATCTTCACATCATTTTGCACTGGTACTGGTTGCAGGTCTAGCAATCCTCTACTTTGCATACAGAAGAAAAGCACCAATTTACTTGATAGACTTTACCTGCTACCGTCCACCTAGTTCTCATAGGCTACCTATTGCCATGTTTGAAGAGAATAGTGTCTTAGATGATTTAGATCCAGAGTCTGTTGCTTTCCAGTGCAAGATCATAGCGAAATCTGGATTCAGCGAGGAAACAGCCATTACTTCATCTTTAGCACAGATACCAAAAGTAAAATCTCTTGCCTTAGCCCTTGATGAGGCCGAAACCATAATGTGTTCAGCAATCTCAGACCTGTTTTGGAGAAACAACATCAACCCAAAATCCATCGACATACTAATCACCAACAGTTGTGTGTTCTGTCCTACACCATCTCTTAGTGCCATGGTGGTTAACAAGTTCAAGATGAGGAGCAACATCATGAGCTTCAACCTATCAGGTATGGGGTGTAGCGCCGGAATCATATCGGTGAGTCTGGCTAAGGACTTGTTGAGGGTTCATAGGGGCTCATTAGCTCTAATTGTGAGCTCAGAGACCCTTAATCTGAATTGGTACACAGGTAAAGTACACTCCATGTTGCTGACTAATTGTCTCTTCAGAATGGGTGGTGCTGCTATATTGATGTCTAGCAAGGTTAATGATAAACATAAAGCAAAGTATGAACTACAACATATTGTTAGAACGATCAATGCTCAAGATGATCAAGCTCATAGATGTGTCTACCAGGATGTGGATCCAGAAAACAAAGAAGGTATTTCGATATCAAAGGATGTTGTCCATGTGGCCGGAGATACATTGAAGAAGAACATAGCTTCACTAGGGCCATTAGTTTTGCCATTGAGAGAGCAATTCCTATATGTAATTTCTATTATATGCTGCAAGGTGTTGTATAGAAGAAGATCAAGCATCTATACTCCAAATTTCAATCTCGCCTTCGAGCATTTCTGCATACATTCCGGGGGAAGATCTGTCATAAATGCCATCGAGAGAAGCTTGAGGTTAAGGAAACAGGACGTGGAAGCATCCAACATGACCCTTTACAGATTTGGAAACACGTCGTCTTCTTCGATTTGGTATGAGCTTAGCTACACAGAAGCGAAAGGGAGGATGAAACGTGGCGATAGGGTGTGGCAAATCGCCATTGGAAGCGGATTCAAGTGTAGCAGCGCTGTGTGGAAATGTTTACAGGACGTGACCCCGGACAATGGCAGTGCTTGGAGGGATACAATTAACATGTACCCTGTACAAGTAACTGATATGAAAATAAGTTGA 1479 0.4118 MSLISGHHVLHDQPLCLKNVSITIQLHKHFGKIEPYNLYSLLEMLTQHVSTIIDLIFPSSHHFALVLVAGLAILYFAYRRKAPIYLIDFTCYRPPSSHRLPIAMFEENSVLDDLDPESVAFQCKIIAKSGFSEETAITSSLAQIPKVKSLALALDEAETIMCSAISDLFWRNNINPKSIDILITNSCVFCPTPSLSAMVVNKFKMRSNIMSFNLSGMGCSAGIISVSLAKDLLRVHRGSLALIVSSETLNLNWYTGKVHSMLLTNCLFRMGGAAILMSSKVNDKHKAKYELQHIVRTINAQDDQAHRCVYQDVDPENKEGISISKDVVHVAGDTLKKNIASLGPLVLPLREQFLYVISIICCKVLYRRRSSIYTPNFNLAFEHFCIHSGGRSVINAIERSLRLRKQDVEASNMTLYRFGNTSSSSIWYELSYTEAKGRMKRGDRVWQIAIGSGFKCSSAVWKCLQDVTPDNGSAWRDTINMYPVQVTDMKIS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0951 492 PIRSF Very_long_ch_3-ktacl-CoA_syn 14 492 IPR012392 GO:0006633|GO:0016020|GO:0016747
Ahy4g0951 492 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 382 462 IPR013747 -
Ahy4g0951 492 Pfam FAE1/Type III polyketide synthase-like protein 78 363 IPR013601 GO:0006633|GO:0016020|GO:0016747
Ahy4g0951 492 Gene3D - 105 462 IPR016039 GO:0016746
Ahy4g0951 492 SUPERFAMILY Thiolase-like 292 463 IPR016039 GO:0016746
Ahy4g0951 492 SUPERFAMILY Thiolase-like 73 280 IPR016039 GO:0016746
Ahy4g0951 492 CDD CHS_like 65 461 - -
Ahy4g0951 492 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 55 488 - -
Ahy4g0951 492 PANTHER 3-KETOACYL-COA SYNTHASE 55 488 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0951 Ahy-Chr4 17978617 17980441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0951 6 487 Miscellaneous Gene Families AT1G19440 48.866 6.00e-168 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0951 K15397 - gmx:100783404 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1047 14 18198160 18200519 Ahy4g0951 4 17978617 17980441 hybridization