Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0939 ATGGAGATTCTCAAACTCATTACCATTAATTCACTCTCTTTTGCTTTCTTCTTCTTATACTTATTCTCTTGTTTTAAATTTACATCTTCAGATAGAGCGGAATTGCCCATTCTTGTGTTCAGTTGGTGGGATGATAAGAATACCTTCCATGCCGGTGAGACTGCAGCCATAAAGGTGAAAGTTCTTGAGCGTGCTGATATGATTGATAAAAAATGTTTCAAACCTATTGTAAGTGTTAATGGGAAAGAAGGGAACAGTTCTTATGTGTCTACTGTGTTGTTGAGTTTCAAAGGTAAACCCAGTGATGATTGGAAGATCTATTTCACTCCCATAAAGGTTGGAGTGTTCAATGTATTCATCAAAGATGACCATTATCAAGTCTATGACTCATCCTTGCATTTTCAAGTTGAGCCAGGGAATATGTACCCTTCTGTGTGTGTTGCATCATGGAATGGCATGAAACATGAGTACGAAGCTGGTGCAAAAGCTACCATCACGGTACTCCTCAAAGATGCATTTGGGAACAGTATCTCTAATAACAAGACAACTCAGGTGTCTTATTTGCCTGACTTTAAGTTGTTTGCGCTATATGAAAATAATGGTTCTATTGCTAGTATGCCAGACATATCCAATATTGGATGGAACGAGTTTGATTATGTTATCATTGAGTTTGTTGTTATTAAAGCTGGAAAATTCTCACTGTACATAGAAGGAGGGAATCAAACCTTGAATGGCTCTCCATTACCATTGAAAGTGAATTCAGGACCTGTAGATGTTTCTAAATGTGTTGCCAAATGGAACATTGATTCACATGCATGGCAATTGTCTTCTAAGATGGAAATCTTCATTCATCAATTAGATCAGTATGGGAATCTAGTTTCAGGGTTGTATCCTTTCGATGCAGAAGTCGTCCAAAGAGATACAAACTTGTCAATACCAATATCAGATCAACATTTTGAAGAAGTGGAAGCTGGAATTCAATTATTTTCATTTGGAAATTGGGAACCGGGAAAGTTCCTCTTAACACTATATGATGCCAAGCATAACAAAAGCATTTCCAATATGCCATATGCTTATTCTGTTTTTGTAGGTTATTGTGATGGAATAAAAAGTATTGTTAATGGATCTGGTTTGAATGATTCAGTAGCCGGCATAAAGCAAGAATTCTCTGTTTATTTGAATGATGTTTATGAATATCCTTCTCCTGTTGAAGTAGACATAGTTGAAGTACAAATTCTAAAAGAAAATGACTCGTATAGTGTTTCTCCATTCATTTATCCCATCCTAACTAAAAACGGTACTGTGTCAATTTCAAGAGTGCAACAATATGGTTTTATCAGTGAGATGAATGTTGCCCCTTCCCCTTCAATGGACCTTAATAACAATATTAACAGGAGTGAAAGCTCTATAGCTATGAGTGCCTTCCATGTAGATTACACACCTGAGAAAAGTGGTTTTTATGATATACATGTATATTGTGGAAATGTCTTATTGAATAAGGGTCATACACTCAGAAAAGAAGTAAAAGCAGGTGAAGTTAATGTTTCCTTGTCAAATGTGGTCAAGTTTTCTTCTAAGGTGGCAAAGATGTCAGAAAATGAAATACAAGTGCAGCTTATGGATTCATTTTCAAACCCTGTTCTTGCACAACAATCAAGCTACATGGCTAAAGATGTTGGAACTTATGAGATTTGTGCTTCCTTTGATGGCAAGAATATTCTGCCATGTCCCTTCAGTATCAATGTGTATAGCAGTGAGTATTTTCCCAAAGCCAACAATGATATAGTATCTGTTTGGGAGGATCAATCAATTGCCATTGATGCTTTAGCAAATGATTACTTTGCTGGTGATAATGCAACTATAGTTCAATTCTCAAAACCAGACCATGGTTCACTTCTACAGAATGGAAGGATGTTTCGTTATACTCCATATAAATATTATTATGGAAATGATTCATTTTGGTACACAATATCTGATGTGAATGAAAACCTTGCTAATGCTTATGTAAACATATCTGTTCTCAATGTTCCACCACAATTTGCTTCTGTTCCAAGTGAACTACAAGCAACAGAAGATTTGATATGTCCTAGTTTTGGTGGCTTCTCTGGGTTTGAGATAGCATATTCAAATCCAATAGAGAATATTTCAGTTAATTTGAGTGCACAATTTGGAAGTATACTTTTGTTTCCTATGGTGATGCAATTTGGACAAGCAATGTGGAATGAACTTACCATAAATTCAGGGAATGAAACTGCAAGCAGTTTGCAACTACAAGGCACTGTGGAAGTAATTAATTATGCTCTTCACTCAATTCAGTATCTGGGAAATGAGAACTTTTATGGTGGAGATATTATTCAGGTTTCTGCTAAGAATAAGAATGGAATGAATTCATTGGGTGTTCCCATTTTCATTGACCCTGTCAATGATCCTCCATATATTAGAGTTCCCAACTTCATTGTATTGAAGAGTAATGAAGATGAGACCCTTATTTTTGACAAAGAGAAAGATAAGTTCAACTTTTCCATTGGAGATCCTGATCTTCCTAATTTCCCTGGAGGTCAAAGTAATTTTATGTTGACTTTCTCTATGGAAGTAAATGATGGTTTATTAGTAACAAATCTTCCATCTAACTTGATCAACACAACTGAAGTGAAGCACAAGGATAGTTATCAATGGCAGCCTCTTCAGACATATGTTACAATCTCAAAGCATTTCATGGTCAAAGCTACTGGAATCAGATTTCAGGGCACAGTCAACGACTGCAATGGTGTTATGGAGCAACTGTTTTTTCATGGTGGTGAGCATGGAGGTGTTTTGACATTGACATTGAATGACATGGGAAACCATGGATGTTATCCTAATTGTGCAGAGGGAATGTCAATGCCTTTATATACTGAGGCTATGGTTATTTTAATGAGAAAGCAACTAATGAGTTCATTTGTTGCTCACAGCTTAGGATCAATCATTGTCATTGAATTTGTTGTCATGTTCTCACTGGGAGTGCTGCTTTTATACTTCACATGCAAATGTGCAATTCTCCTTTTACATGAAAGAAGAAATCGTCACAAAAGCATGGTGGCAAGTCAACAATTGAAATCCAGCATGCCTCAAACTCAACATTTAAGCATTTTGTAG 3135 0.362 MEILKLITINSLSFAFFFLYLFSCFKFTSSDRAELPILVFSWWDDKNTFHAGETAAIKVKVLERADMIDKKCFKPIVSVNGKEGNSSYVSTVLLSFKGKPSDDWKIYFTPIKVGVFNVFIKDDHYQVYDSSLHFQVEPGNMYPSVCVASWNGMKHEYEAGAKATITVLLKDAFGNSISNNKTTQVSYLPDFKLFALYENNGSIASMPDISNIGWNEFDYVIIEFVVIKAGKFSLYIEGGNQTLNGSPLPLKVNSGPVDVSKCVAKWNIDSHAWQLSSKMEIFIHQLDQYGNLVSGLYPFDAEVVQRDTNLSIPISDQHFEEVEAGIQLFSFGNWEPGKFLLTLYDAKHNKSISNMPYAYSVFVGYCDGIKSIVNGSGLNDSVAGIKQEFSVYLNDVYEYPSPVEVDIVEVQILKENDSYSVSPFIYPILTKNGTVSISRVQQYGFISEMNVAPSPSMDLNNNINRSESSIAMSAFHVDYTPEKSGFYDIHVYCGNVLLNKGHTLRKEVKAGEVNVSLSNVVKFSSKVAKMSENEIQVQLMDSFSNPVLAQQSSYMAKDVGTYEICASFDGKNILPCPFSINVYSSEYFPKANNDIVSVWEDQSIAIDALANDYFAGDNATIVQFSKPDHGSLLQNGRMFRYTPYKYYYGNDSFWYTISDVNENLANAYVNISVLNVPPQFASVPSELQATEDLICPSFGGFSGFEIAYSNPIENISVNLSAQFGSILLFPMVMQFGQAMWNELTINSGNETASSLQLQGTVEVINYALHSIQYLGNENFYGGDIIQVSAKNKNGMNSLGVPIFIDPVNDPPYIRVPNFIVLKSNEDETLIFDKEKDKFNFSIGDPDLPNFPGGQSNFMLTFSMEVNDGLLVTNLPSNLINTTEVKHKDSYQWQPLQTYVTISKHFMVKATGIRFQGTVNDCNGVMEQLFFHGGEHGGVLTLTLNDMGNHGCYPNCAEGMSMPLYTEAMVILMRKQLMSSFVAHSLGSIIVIEFVVMFSLGVLLLYFTCKCAILLLHERRNRHKSMVASQQLKSSMPQTQHLSIL* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0939 1044 Pfam Bacterial Ig domain 579 660 - -
Ahy4g0939 1044 ProSiteProfiles Filamin/ABP280 repeat profile. 553 582 IPR017868 -
Ahy4g0939 1044 Gene3D Immunoglobulins 140 253 IPR013783 -
Ahy4g0939 1044 Gene3D Immunoglobulins 366 508 IPR013783 -
Ahy4g0939 1044 Pfam Filamin/ABP280 repeat 365 496 IPR017868 -
Ahy4g0939 1044 PANTHER JITTERBUG, ISOFORM N 202 972 IPR044801 GO:0030036|GO:0051015
Ahy4g0939 1044 PANTHER JITTERBUG, ISOFORM N 26 142 IPR044801 GO:0030036|GO:0051015
Ahy4g0939 1044 SUPERFAMILY E set domains 366 498 IPR014756 -
Ahy4g0939 1044 Gene3D - 583 672 - -
Ahy4g0939 1044 PANTHER JITTERBUG, ISOFORM N 202 972 - -
Ahy4g0939 1044 PANTHER JITTERBUG, ISOFORM N 26 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0939 Ahy-Chr4 17460197 17465720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0939 - - ccaj:109808168 1602.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1031 14 17872520 17878273 Ahy4g0939 4 17460197 17465720 hybridization