Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0848 ATGATAATGTCTTCGTTCTCATGGGTTACTGCTCTATTGCTTCTTCTATACATAGCTAAGCTTCGCTTGGCAGATGCTCAAATTGGTGTGTGCTATGGGATGCTGGGCAACAATCTACCAGCAGCAAAGGAAGTGATAGATGTTTACAGATCAAACAACATCAAACGAATGAGACTCTATGATCCCAATCAAGCTGCTCTACAAGCACTTAGAAACTCCGGCATTGAACTCATTCTTGGAGTTCCAAACTCTGACCTTCAAGGGCTTGCCACAAACTCTGACAGCGCACGCCAATGGGTGCAAAGAAATGTGCTAAGCTTTTGGCCTAGTGTCAAAATCAAGTACATTACAGTTGGTAATGAAGTGAGACCTGTTGGAGACTCCACTTCATGGATGGCTCAGTATGTTCTCCCAGCAATTCAGAATGTATACCAAGCTATTAGAGCTCAAGGCCTCCATGATCAAATCAAGGTTTCAACTGCCATTGACATGTCCCTCTTAGGAAACTCTTTTCCTCCTTCACAAGCCTCATTTAGGGCTGACGTCAGGTCATACCTAGACCTAATTATAGGGTATTTGGTATATGCAGGTGCACCATTACTAACCAACATTTATCCTTACTTTAGCTATAAAGATAACCCACGTGACATATCACTACCTTATGCTATTTTCACATCACCAAATGTTGTGGTACAAGATGGTCAATATGGGTACCAGAATCTTTTTGATGCTATGTTAGATGCAGTGCATGCTGCCATTGATAACACTGGAATTGGTTTTGTTGAGGTTGTTGTTTCTGAGAGCGGGTGGCCCTCAAGTGGAGATTTTGGTGCAACTTATGATAGTGCCCAGATTTATTTGGATAATTTGATTCGTCATGTTAATGGGGGCACTCCTAGAAGGCCTTGGAAGCCTACAGAAACTTATTTGTTTGCCATGTTTGATGAAAATCAGAAGAATCCAGAGCTGGAGAAGCATTTTGGACTTTTCTTTCCTAATAAACAGAAGAAGTATTCATTTGGGTTTGGTGCAGAAAGGAGAAGGGAATTCTTTGCCAATGAGTTCAATGCAACAGTTGTTCCATTATTGAAGAGTGACATTTGA 1104 0.4139 MIMSSFSWVTALLLLLYIAKLRLADAQIGVCYGMLGNNLPAAKEVIDVYRSNNIKRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNSDSARQWVQRNVLSFWPSVKIKYITVGNEVRPVGDSTSWMAQYVLPAIQNVYQAIRAQGLHDQIKVSTAIDMSLLGNSFPPSQASFRADVRSYLDLIIGYLVYAGAPLLTNIYPYFSYKDNPRDISLPYAIFTSPNVVVQDGQYGYQNLFDAMLDAVHAAIDNTGIGFVEVVVSESGWPSSGDFGATYDSAQIYLDNLIRHVNGGTPRRPWKPTETYLFAMFDENQKNPELEKHFGLFFPNKQKKYSFGFGAERRREFFANEFNATVVPLLKSDI* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0848 367 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Ahy4g0848 367 Pfam Glycosyl hydrolases family 17 28 341 IPR000490 GO:0004553|GO:0005975
Ahy4g0848 367 SUPERFAMILY (Trans)glycosidases 28 341 IPR017853 -
Ahy4g0848 367 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 19 349 - -
Ahy4g0848 367 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 349 IPR044965 GO:0004553|GO:0005975
Ahy4g0848 367 Gene3D Glycosidases 27 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0848 Ahy-Chr4 14021003 14023645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0848 34 346 Glycoside Hydrolase AT4G16260 61.270 3.78e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0848 - - ccaj:109791097 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0942 14 15523142 15526057 Ahy4g0848 4 14021003 14023645 hybridization