Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0790 ATGGTGGTAGCTTCACCCAATTCAATCCAAACCGAAAAGATTGTATCCATCAACCTTCCCACCATAGACTTATCCAAAGAAAGAGCAACGGTTGCAAAGCTGATCGTGAAAGCCAGCGAAGAGTATGGATTCTTCAACGTCATCAACCACCGGATTCCTCAACACATAATAGACAACATGGAGGAAGCCGGCTTCGACTTCTTCGCCAAGCCGGCTTCCCAAAAGGCGAAACTTGCATCCAATTACGATAGCGTTCGGCTAGGGTATGGATGCAAGAACATAGGGTTCAATGGCGACGTTGGTGAGGTGGAATACCTCCTTTTAAATGGAAGTGCTTCTCATATTTCTAAGATTTCCACAACCATCTCCAATGACCCATCAAACTTCAGGTATAGGGTGGTGAGTGCATACAGAGATGCAGTGGAGGAGTTAGCATGTGAGATATTGGAGCTGATGGCAGAGGGTTTGGGGGTCCCCAACACTTCCATCTTCACAACCTTCATCAACCACCCTGATAGCGACTCACTCCTCAGATTCAATCACTACCCCCCACTTCCACCTTCTCTTGCCTTTGGGGACCATTCTGACCCTCAGATCATAACCCTTCTCAGATCCAACCCTGTTTCTGGCCTCCAAATTTCCCTCCAACACGGTCTGTGGATCCCAGTCCTTCCTGACCCCAAAGCTTTCTCTGTTAACGTCGGTGATTTATTACAGGTTATGACAAATGGAAGATTTGTGAGTGTCCGGCACAGGGCGGTGACAAACTCAGAGAAGGCAAGAATGTCAATAGCATATTTTGGGGCTCCGCCACTCAATGCGTGTATCGTTGCTCCGCCGGAGATGGTTACACCAGAGAGGCCCTCCCTACTGTTTAGGGCATTCACTTGGGCTGAGTACAAGAAAGCCACCTACTCTCTTAGGCTTGGAGACACCCGCATTGACCTCTTTAGGAATTGA 960 0.4833 MVVASPNSIQTEKIVSINLPTIDLSKERATVAKLIVKASEEYGFFNVINHRIPQHIIDNMEEAGFDFFAKPASQKAKLASNYDSVRLGYGCKNIGFNGDVGEVEYLLLNGSASHISKISTTISNDPSNFRYRVVSAYRDAVEELACEILELMAEGLGVPNTSIFTTFINHPDSDSLLRFNHYPPLPPSLAFGDHSDPQIITLLRSNPVSGLQISLQHGLWIPVLPDPKAFSVNVGDLLQVMTNGRFVSVRHRAVTNSEKARMSIAYFGAPPLNACIVAPPEMVTPERPSLLFRAFTWAEYKKATYSLRLGDTRIDLFRN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0790 319 Pfam 2OG-Fe(II) oxygenase superfamily 174 268 IPR044861 -
Ahy4g0790 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 318 - -
Ahy4g0790 319 Coils Coil 134 154 - -
Ahy4g0790 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 172 270 IPR005123 -
Ahy4g0790 319 Gene3D - 3 308 IPR027443 -
Ahy4g0790 319 SUPERFAMILY Clavaminate synthase-like 15 311 - -
Ahy4g0790 319 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 318 - -
Ahy4g0790 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 90 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0790 Ahy-Chr4 12103262 12108393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0790 10 318 Glycosyltransferase AT5G59530 28.657 7.13e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0790 K04125 - gmx:100811043 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g0879 14 13821779 13827340 Ahy4g0790 4 12103262 12108393 hybridization
Ahy11g2706 11 143632736 143638173 Ahy4g0790 4 12103262 12108393 PCT
Ahy1g2241 1 100271162 100276154 Ahy4g0790 4 12103262 12108393 PCT
Ahy4g0790 4 12103262 12108393 Ahy11g2706 11 143632736 143638173 PCT
Ahy4g0790 4 12103262 12108393 Ahy1g2241 1 100271162 100276154 PCT