Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4196 ATGGCGTTGAGGAGCATGATTCGTTCGGCCATGGCTTTACAACCCTTGCTACCCCGGCCTTGTATTCACCATTCCAGTCTCACGCCCATTCACATTGCCTCTCGCCGCTTTCGTCCTCCGCAACCGCCTACCTCTTGCTCTCACCATGAATCGACGCCGTCTCACGACCATCAAGAACCTCCACCTCAACAACCTTCCGAGGTATCCAAGAGCGGTGGCGCCCACGCTGGTTATGATGAATGGCTCGCATTGGATCAGAAGGTCAACTCGTATCCAAGTGTTCGAGGGTTCACCGCAATTGGAATTGGAGGTGACGATTTTGTGCAAGCCATGGTCCTTGCCGTTCAATCTGTTATCCAACACCCAATTCCTCAGGGATGTGTGAAGCAGAAGTCATCGTCGGGGGGCAAATATGTATCTGTAAATATTGGACCCATTGAAGTTGTTTCCAGTGAGCAGGTCCAAGCTGTATATAATGCCATGAGGAGGGATGACAGGATGAAATACTTTTTCTAA 516 0.5039 MALRSMIRSAMALQPLLPRPCIHHSSLTPIHIASRRFRPPQPPTSCSHHESTPSHDHQEPPPQQPSEVSKSGGAHAGYDEWLALDQKVNSYPSVRGFTAIGIGGDDFVQAMVLAVQSVIQHPIPQGCVKQKSSSGGKYVSVNIGPIEVVSSEQVQAVYNAMRRDDRMKYFF* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4196 171 Pfam Protein of unknown function (DUF493) 88 170 IPR007454 -
Ahy3g4196 171 SUPERFAMILY YbeD/HP0495-like 85 170 IPR027471 -
Ahy3g4196 171 MobiDBLite consensus disorder prediction 35 74 - -
Ahy3g4196 171 Gene3D - 85 171 - -
Ahy3g4196 171 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 78 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4196 Ahy-Chr3 141967562 141970078 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4196 - - ahf:112734854 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4479 13 145002508 145005169 Ahy3g4196 3 141967562 141970078 hybridization
Ahy20g0937 20 12618660 12622013 Ahy3g4196 3 141967562 141970078 PCT
Ahy10g0665 10 7110252 7114406 Ahy3g4196 3 141967562 141970078 PCT
Ahy3g4196 3 141967562 141970078 Ahy20g0937 20 12618660 12622013 PCT
Ahy3g4196 3 141967562 141970078 Ahy10g0665 10 7110252 7114406 PCT