Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g4061 ATGTCTTCTTCCACTTTCACTACTGTCCCGCCCTCCTTCTTCTCCTTTGCTCGCTCTCAATCCCTCCCTCCCCCTAACCTCCCTTTCCACATCCCCATTCGCCGCTCCTTCCCTCGATTCACCGTCTCCGCCCATTCCTCTACTTCCAATTCCACCACCGCCACCAATCCCATTCTTCGCAACCTCAAAACCCTAGCCGGTGCAGCCGTATTCGCCGCCGCAATCGCCGTCAAGTTCTCCGCTCTCCCCGCCCGCGCCGAACTACCTCCCACCACCTTCACCTCCGCCGAGCCGTCCCCTCAGATCCTCGAAGAATCCACTACCGAAAACACCGCCGCCGAAGCAGCTGCAACAACAGCAGCAGCATCTTCCTCTTCTTCGTCTTCTTCCCCTCTGTCTGAGTTCCTCGGAACCAACGACGAAGCTGTCAGTGCGCTCAAGTCGCTGCTGCAGCAGAAGCTCGAAGTAGGCGAGGACGAGGAGGCGCTCTCCATTCTCAAACGGTTATGCACCGCGCAACCCGAGGTAACAGACTGGAAGTTCCTCACGGCAAGGCTAATGAGCGAAATAGGCGAAATTGAGAACGCACGCAAGGTGTATGAAGAAATTCTCGCTTCGAATCCGCTCTCGTTCGAGGCTCTATTCGAGAATGCGTTGTTAATGGATCGGAGCGGAGAAGGAGAAGCGGTGATGAAGAGGCTGGAGGAGGCTCTTGCGGTAGCAAAGGAGAAGAACAAGGCGAAGGAAGCAAGGGACGTGAGACTAATCATGGCGCAGATCCAGTTCCTTCAGAAGAATGTTGATGAAGCTTTGGGGATTTATCAGCAATTGACCAAAGAGGACCCTTCTGATTTCCGGCCTTACTTTTGCAGAGGAATGATTTATAGTTTGCTTGATCGGAATGACGAGGCGAAGGAACAATTCGCCAAGTATCGAGAATTGTCGCCAAAGAAGTTTGAGGTTGATGGGTACTTGAGGACTCCTTTGTCAAGGATGAAATTGTTTGGTTCCGACGAAAGCTAA 1023 0.5308 MSSSTFTTVPPSFFSFARSQSLPPPNLPFHIPIRRSFPRFTVSAHSSTSNSTTATNPILRNLKTLAGAAVFAAAIAVKFSALPARAELPPTTFTSAEPSPQILEESTTENTAAEAAATTAAASSSSSSSSPLSEFLGTNDEAVSALKSLLQQKLEVGEDEEALSILKRLCTAQPEVTDWKFLTARLMSEIGEIENARKVYEEILASNPLSFEALFENALLMDRSGEGEAVMKRLEEALAVAKEKNKAKEARDVRLIMAQIQFLQKNVDEALGIYQQLTKEDPSDFRPYFCRGMIYSLLDRNDEAKEQFAKYRELSPKKFEVDGYLRTPLSRMKLFGSDES* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g4061 340 MobiDBLite consensus disorder prediction 90 133 - -
Ahy3g4061 340 Coils Coil 260 280 - -
Ahy3g4061 340 Gene3D Tetratricopeptide repeat domain 254 326 IPR011990 GO:0005515
Ahy3g4061 340 Pfam Tetratricopeptide repeat 252 283 IPR019734 GO:0005515
Ahy3g4061 340 SUPERFAMILY TPR-like 117 318 IPR011990 GO:0005515
Ahy3g4061 340 Gene3D Tetratricopeptide repeat domain 109 253 IPR011990 GO:0005515
Ahy3g4061 340 SMART tpr_5 285 318 IPR019734 GO:0005515
Ahy3g4061 340 SMART tpr_5 251 284 IPR019734 GO:0005515
Ahy3g4061 340 MobiDBLite consensus disorder prediction 92 133 - -
Ahy3g4061 340 Coils Coil 231 251 - -
Ahy3g4061 340 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 115 339 - -
Ahy3g4061 340 PANTHER PROTEIN SLOW GREEN 1, CHLOROPLASTIC 115 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g4061 Ahy-Chr3 140059361 140060891 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g4061 - - aip:107632119 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4338 13 143058265 143059808 Ahy3g4061 3 140059361 140060891 hybridization