Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3557 ATGGCAACTTTGGCGCACTTGAGAATGAGATTATTTTCCGCGAAAGCACGCAAGAAATCAGTCTTTCCCCTTCTCTGTTCCTCACTTCCACACATGGGTGCTTCTGGAAACAACCTTCTCCAAGTTCTCTTCAGGAACTTCGATGTTCTTGCTCTCCCCTTCGTCACCCTTGTTTACCCCTTACATGCTTCCATTAGGGCCATAGAGACAAGGTCTCATACTCATTATCAACAATGGCTTACCTACTGGGTTCTTTACTCTTTGATGACCCTCTTTGAGATCACATTTGCCAAAGTTCTTCAACTGCTTCCCATTTGGCCGTATGCTAAGTTGATATTCAGTTGCTGGTTGGTTCTGCCTCAGTTCAACGGCGCAGCAACTGTTTATGGAAATTACATAAGGCCCTTCTACATGAACCCGCAAATCCGAGTCCCTCAAGCTTCTCAAATGTGGTATTTCCCGCGCAAGAACAACATATTCAACCAACCAGATGATGTTCTAACCGCTGCTCAGAGATACATGAATCAGCATGGTACAGAAGCATTTCAAAGACTTATAACCAAGAATGAGAGAGTAGCCAGAGCAAGGAGGAACCGAAACCATGTGATCTATGATGATGACTACAAGTATTGA 633 0.4423 MATLAHLRMRLFSAKARKKSVFPLLCSSLPHMGASGNNLLQVLFRNFDVLALPFVTLVYPLHASIRAIETRSHTHYQQWLTYWVLYSLMTLFEITFAKVLQLLPIWPYAKLIFSCWLVLPQFNGAATVYGNYIRPFYMNPQIRVPQASQMWYFPRKNNIFNQPDDVLTAAQRYMNQHGTEAFQRLITKNERVARARRNRNHVIYDDDYKY* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3557 210 PANTHER HVA22-LIKE PROTEINS 33 209 IPR004345 -
Ahy3g3557 210 PANTHER HVA22-LIKE PROTEIN 33 209 - -
Ahy3g3557 210 Pfam TB2/DP1, HVA22 family 60 136 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3557 Ahy-Chr3 134647755 134649025 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3557 K17279 - gmx:100499934 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1694 15 43547431 43550190 Ahy3g3557 3 134647755 134649025 hybridization