Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3554 ATGTTGGACGGCCGTTCCTGTGTGGTTCCGAGGTTGTTTCCCAGCTCCTACCAGGCAGAAAACAAGTGGCCTTTCATGACATATCTGCCTGACTTGGACATCAAGAACGGCAAGCGCCCTTTGGAAAATGATGTCAATGATGAACCCAATCCCAGGAAGGTTAATAGCAAGAGATTGGGTTCTCGCCGCCTCCGAGGTGAAGCCAATCGAGTTTTGTTTCAACAGCAGCCTTATCAGATTGAGGATTCTGTTGTTCCGAAAATTGATGAGGACGTTGATGATGGTGTTGATAGTGATGATGATGACTCTACCATGCAGGATCACAGGAATGATTTTGTGCTGCTGAGTGGTCTCCAAATAGATGAAGATGCTCTAGCTCATTCTGCTGAGCTGTTAGCTGAACATGACAAGTATCAAGCCAGGGATTCATTGGAGTCCGGTTTCCATCAATCTGATGAGCAGCAGGAGAATCAATCCAAGCATTTTTCTGATTCTGGAGTTCAGCAATCTGACGAGATGCAGCTGCTTGCTGCAAATTTGTCAAATTCCAGTGACCAGCCATCTGATCAGCAGCAAGAGAATCATTCCGGTGATTCATCGGATTCTGGTTCCCTTCTGCCTAGAATGAACAGAGACAGCTCGATTGCCTGTCTCAGCCGCTGTTCGAGGTCCGATTATGGTTCTCTTGCATCACTGAACTCAAGCTTTCGCAACATTATTCGAAGTGGTGAGCTATACAAGTGGAGGAGACTGAATGGAATCATAGAACACTGGGTTTACTTTTCCTGTGCCCTCCTTGAATGGGAGGCCTATGATCCGATTCGCGAAAGGTGGATGCATTTGCCTAGGATGGCTTCTAACGAATGCTTCATGTGTTCGGACAAGGAGTCCTTGGCTGTTGGTACTGAACTACTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCATTTACAGATACAGTCTTTTGACGAATTCATGGTCTTCGGGAATGCGGATGAATGCTCCAAGATGCTTGTTTGGATCTGCTAGCCTTGGAGAGATTGCAATTTTGGCCGGTGGGTGTGATTCCGAGGGACGTATTCTGGACTCTGCTGAACTGTATAATTCCGAGAATCAACAATGGGAAATGCTCCCACCCATGAAAAAGCCTAGGAAGATGTGCTCTGGAGTATTCATGGATGGAAAGTTCTATGTGATTGGTGGAATTGGTGGAAGCGAGTCTAAGCTTCTTACCTGTGGTGAGGAGTACAATCTACAGACTAGGACATGGACAGAAATTCCTAGCATGTCCCCAGGACGCAATGCTAGGGGAGCCGAGATGCCTGCAACAGCCGAGGCGCCACCTCTGGTTGCTGTTGTAAATAATGAATTATATGCTGCTGATTATGCTGACATGGAGGTTAAGAAGTACGATAAAGAGAGAAAAGTGTGGAATACCATTGGGAGACTTCCGGAACGAGCAGTGTCAATGAATGGCTGGGGTCTTGCATTCAGGGCATGCGGAAATCGGCTAATCGTGATAGGTGGACCTCGGACACATGGTGGGGGTTTTATTGAACTCAACTCGTGGGTGCCGAGCGAAGGACCTCCCCAATGGAACCTACTGGCCAGGAAACGGTCTGGTAACTTTGTCTATAACTGTGCCGTGATGGGATGTTGA 1659 0.475 MLDGRSCVVPRLFPSSYQAENKWPFMTYLPDLDIKNGKRPLENDVNDEPNPRKVNSKRLGSRRLRGEANRVLFQQQPYQIEDSVVPKIDEDVDDGVDSDDDDSTMQDHRNDFVLLSGLQIDEDALAHSAELLAEHDKYQARDSLESGFHQSDEQQENQSKHFSDSGVQQSDEMQLLAANLSNSSDQPSDQQQENHSGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNSSFRNIIRSGELYKWRRLNGIIEHWVYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSENQQWEMLPPMKKPRKMCSGVFMDGKFYVIGGIGGSESKLLTCGEEYNLQTRTWTEIPSMSPGRNARGAEMPATAEAPPLVAVVNNELYAADYADMEVKKYDKERKVWNTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTHGGGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVMGC* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3554 552 MobiDBLite consensus disorder prediction 83 107 - -
Ahy3g3554 552 SUPERFAMILY Kelch motif 265 549 IPR015915 GO:0005515
Ahy3g3554 552 MobiDBLite consensus disorder prediction 181 207 - -
Ahy3g3554 552 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 552 - -
Ahy3g3554 552 Pfam Kelch motif 335 380 IPR006652 GO:0005515
Ahy3g3554 552 Pfam Kelch motif 383 430 IPR006652 GO:0005515
Ahy3g3554 552 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 552 - -
Ahy3g3554 552 MobiDBLite consensus disorder prediction 37 59 - -
Ahy3g3554 552 MobiDBLite consensus disorder prediction 147 168 - -
Ahy3g3554 552 SMART kelc_smart 347 394 IPR006652 GO:0005515
Ahy3g3554 552 SMART kelc_smart 303 346 IPR006652 GO:0005515
Ahy3g3554 552 SMART kelc_smart 395 443 IPR006652 GO:0005515
Ahy3g3554 552 Gene3D - 259 538 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3554 Ahy-Chr3 134602589 134606175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g3554 - - gmx:100791897 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1687 15 43036779 43040570 Ahy3g3554 3 134602589 134606175 hybridization