Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2516 ATGGTTTTCGTTTCGCGAGCTGCTACACCGTCACACTGTATTCGCCATGACACCATATTTCGGCACAGCTTCGATGGGTCCAATGTTAGGAGGAGACCTTGCTTTGCTGTCTCTCCTTCTTCCTGGGATTCTGCTAAGAAGGGTTGGCGTGGTCGTAGTATGATTGTTGCAGCTAGCCCTCCCACCGAAGATGCTGTGGTTGCTGCGGAGCCACTCACGAAGAAGGATCTTGTGGATTATCTTGCCTCTGGTTGCAAGACCAAGGATAAATGGAGGATAGGTACTGAACATGAGAAGTTCGGCTTTGAGTTTGGAAGCTTGCGTCCAATGAAGTACGAGCAAATAGCAGAGTTGTTGAATGGCATTGCTGAGAGATTTGAGTGGGAAAAAATAATGGAAGGTGATAAAATTATTGGACTCAAACAGGGGAAGCAGAGCATATCATTGGAGCCAGGTGGTCAGTTTGAGCTTAGTGGAGCCCCTCTTGAAACCTTGCATCAGACTTGTGCTGAAGTTAATTCACACCTCTATCAGGTTAAAGCTGTTGCGGAGGAAATGGGCATTGGATTTTTGGGTATTGGCTTCCAGCCAAAGTGGGGAATCAAAGACATACCTATAATGCCAAAGGGAAGATATGATATCATGAGGAATTACATGCCTAAAGTTGGTTCCCTTGGTCTTGACATGATGTTCAGAACATGTACTGTACAGGTCAATCTGGACTTCAGTTCTGAAGCTGATATGATCAGGAAATTTCGCGCTGGCCTAGCTTTGCAGCCCATAGCAACAGCTCTTTTTGCAAATTCACCCTTCACAGAAGGAAAGCCGAATGGTTTTGTCAGTATGAGAAGCCAAATTTGGACTGATACTGATAAGGAACGCACAGGCATGCTCCCCTTTGTTTTTGATGACTCATTCGGGTTTGAGCAGTACGTCGATTATGCTCTTGATGTTCCAATGTATTTTGTCTATCGGAAAAAGAAATATGTCGACTGCACTGGAATGACTTTTAGGGACTTTTTGGCTGGAAAACTTCCTTGTCTTCCCGGTGAATTACCAACCCTCAATGATTGGGAGAATCACTTGACGACTATATTTCCTGAGGTCAGGCTGAAGAGGTATTTGGAGATGAGAGGTGCTGATGGAGGGCCATGGAGAAGGTTATGTGCCTTACCAGCACTTTGGGTAGGGCTATTGTACGATGATGTTTCTCTACAAAACATTTTAGATATGACAGCAGATTGGACTCCGGAAGAAAGGCAAATGCTAAGGAACAAGGTTCCCATAACTGGCCTAAAAACACCATTTAGAGACGGTCTTCTGAAGCATGTTGCTGAAGAAGTTCTACAGTTAGCAAGGGATGGCTTGGAAAGAAGAGGCTTTAAAGAAACAGGATTTTTGAATGAGGTAGCTGAGGTGGTTAGAACAGGTATCACTCCAGCTGAGAAGCTTCTGGAATTGTATCATGGAAAGTGGGGGCAATCTGTAGATCATGTATTTGAGGAATTGCTTTATTGA 1518 0.444 MVFVSRAATPSHCIRHDTIFRHSFDGSNVRRRPCFAVSPSSWDSAKKGWRGRSMIVAASPPTEDAVVAAEPLTKKDLVDYLASGCKTKDKWRIGTEHEKFGFEFGSLRPMKYEQIAELLNGIAERFEWEKIMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGIKDIPIMPKGRYDIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFTEGKPNGFVSMRSQIWTDTDKERTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKKKYVDCTGMTFRDFLAGKLPCLPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPALWVGLLYDDVSLQNILDMTADWTPEERQMLRNKVPITGLKTPFRDGLLKHVAEEVLQLARDGLERRGFKETGFLNEVAEVVRTGITPAEKLLELYHGKWGQSVDHVFEELLY* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2516 505 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 45 505 IPR035434 GO:0004357|GO:0006750
Ahy3g2516 505 PANTHER GLUTAMATE--CYSTEINE LIGASE 45 505 - -
Ahy3g2516 505 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 71 505 IPR011556 GO:0004357|GO:0006750
Ahy3g2516 505 Pfam Glutamate-cysteine ligase family 2(GCS2) 122 415 IPR006336 GO:0004357|GO:0042398
Ahy3g2516 505 SUPERFAMILY Glutamine synthetase/guanido kinase 83 503 IPR014746 GO:0003824
Ahy3g2516 505 PIRSF GCL 58 505 IPR035434 GO:0004357|GO:0006750
Ahy3g2516 505 Gene3D - 57 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2516 Ahy-Chr3 110889014 110894881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2516 K01919 - gmx:547545 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2848 13 114136504 114142343 Ahy3g2516 3 110889014 110894881 hybridization