Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2448 ATGAGGGTGTTGTCATCAAGGTTCAAGTTTGTGTCAAGAGCAGTGGCGCACGAGGATCATGATCATAGTGAGGTGCAAAGAATAATGTACCCTACAACAGAAGGAACAAGGTTGGGGACTTGTCTAACAGTTTGGAAAAAATCCCTTGTCATTAACTGCAAAGGATTCACAGTCATCGATTCATGTGGAAATCTGGCGTACCGAGTTGACAATTACAGCGTCCACCCTCACCAACTCACTCTCATGGATGCTTCTGGAAACTCTCTCCTCACCATGCACCGCCGCCGCACGAAGCTTGGACTTGTATATAGCTGGTATGTGTACGAAGGGGAGAATGAGGGAAGAGAGAAAGAGAGTGCAGTGTGTTGTGTGAGGAAGCGTGTGAATATCTTAAAGGGCAATGGCAATCCCAGGGTTGAGGCATGCGTGTATTGTCTATTAGGTCCAGAGTCAGATAAAAAACGACATGGACATGCCGCGTTTACAGTTGAAGGTTCCTATGCAGATAGAACATGTAAGGTGTTGGATAAGTCCAAGAGTGTGGTGGCTGAAATCAAGAGAAAAGAAGCCAATTCCAAACACGTTTCTTTTGGGATAGACATTTTTCACTTAATTGTTCACCCTGGCTTTGATCCTACATTTGCCATGGCACTCCTTTTACTACTCGACCAAATGTTCTCATAA 684 0.4474 MRVLSSRFKFVSRAVAHEDHDHSEVQRIMYPTTEGTRLGTCLTVWKKSLVINCKGFTVIDSCGNLAYRVDNYSVHPHQLTLMDASGNSLLTMHRRRTKLGLVYSWYVYEGENEGREKESAVCCVRKRVNILKGNGNPRVEACVYCLLGPESDKKRHGHAAFTVEGSYADRTCKVLDKSKSVVAEIKRKEANSKHVSFGIDIFHLIVHPGFDPTFAMALLLLLDQMFS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2448 227 SUPERFAMILY Tubby C-terminal domain-like 40 226 IPR025659 -
Ahy3g2448 227 PANTHER PROTEIN LURP-ONE-RELATED 17 17 226 - -
Ahy3g2448 227 Pfam LURP-one-related 41 220 IPR007612 -
Ahy3g2448 227 Gene3D - 37 227 IPR038595 -
Ahy3g2448 227 PANTHER - 17 226 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2448 Ahy-Chr3 105686841 105687971 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2448 - - lja:Lj0g3v0155199.1 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2778 13 107620032 107621193 Ahy3g2448 3 105686841 105687971 hybridization
Ahy5g1561 5 41423442 41424412 Ahy3g2448 3 105686841 105687971 PCT