Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2409 ATGGCAGAACCACCTAAAGGGGACATCTCCCCGGAGAGCCGCAACGAGGACGACGCCGGAGCCGCCTTCGTCCTCGAGTCCAAAGGTGAATGGTGGCATGCGGGGTTTCATCTAACGACGGCGATAGTGGGGCCAACAATACTCACGCTGCCGTACGCATTCAGGGGGCTGGGATGGGGCCTTGGGTTCTTGTGCCTCACCGTGATGGGCCTAGTCACCTTCTACTCTTACTTCCTCATGTCCAGAGTGCTCGATCACTGCGACAAATCAGGCCGTCGCCATATCCGTTTCCGCGAACTCGCCGCCGACGTCTTTGGTTCGGGATGGATGTTCTATTTTGTAATCTTTATTCAAACAGCAATCAACACTGGAGTTGGTGTGGGGGCAATTTTGCTTGCTGGCGAATGTCTTAAGATCATGTACTCGAATCTTTCACCCCACGGAAGCCTAAAGCTGTATGATTTTATAGCAATGGTGACAGTGGTGATGATAGTATTATCTCAGCTTCCCACATTCCATTCGCTGCGACACATCAATTTGTGTTCTCTGTTTCTAAGCCTGGCCTACACCTTCCTCGTCGTTGGTGCCTGTATTCATGCAGGTACCTCAAAAAACGCACCTTCAAGGGACTATTCCCTAGAAGCCAACAAGTCTGATAGGGTCTTCAACGCCTTCACTTCCATCTCCATTATTGCAGCAATATTTGGGAATGGCATACTCCCAGAAATACAAGCAACTGTAGCACCCCCTGCCACAGGGAAGATGGTAAAAGGGCTCATCATGTGTTATGCCGTAATATGCGTCACATTTTATTCTGCTGCAGTTTCTGGATATTGGGTATTCGGAAACAAGTCCAATTCTAACATCTTGAAGAGCCTTCTTCCAGATGACGGTCCTTCTCTCGCTCCCACTTGGCTCCTCGGCCTCGCCGTCGTCTTTGTGCTTCTTCAGCTCTTTGCCATTGGCCTCGTGTATTCTCAAGTTGCATATGAGATAATTGAGAAGAATTCAGCAGATGCCAAGCAGGGAATGTTTTCCAAAAGAAACCTCATTCCGCGCATAATTCTTCGAACCATTTACATGATATTCTGCGGATTTATGGCGGCCATGCTACCATTTTTCGGGGACATCAACGCTGTGGTTGGTGCTTTAGGCTTCATTCCTCTGGATTTCGTTCTGCCTATGCTTATGTACAACATAACCCACAAGCCCTCCAATTCATCGTTAACTTATTGGATCAACATCTCAATCATAGTTGTCTTTACTGGTGCTGGAATCATGGGTGCATTCTCTTCTATAAGGATATTGGTACTTGATGCCAACAAATTCAAGCTCTTTGGCGGCGATATTGTCGATTAA 1359 0.4768 MAEPPKGDISPESRNEDDAGAAFVLESKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFLCLTVMGLVTFYSYFLMSRVLDHCDKSGRRHIRFRELAADVFGSGWMFYFVIFIQTAINTGVGVGAILLAGECLKIMYSNLSPHGSLKLYDFIAMVTVVMIVLSQLPTFHSLRHINLCSLFLSLAYTFLVVGACIHAGTSKNAPSRDYSLEANKSDRVFNAFTSISIIAAIFGNGILPEIQATVAPPATGKMVKGLIMCYAVICVTFYSAAVSGYWVFGNKSNSNILKSLLPDDGPSLAPTWLLGLAVVFVLLQLFAIGLVYSQVAYEIIEKNSADAKQGMFSKRNLIPRIILRTIYMIFCGFMAAMLPFFGDINAVVGALGFIPLDFVLPMLMYNITHKPSNSSLTYWINISIIVVFTGAGIMGAFSSIRILVLDANKFKLFGGDIVD* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2409 452 PANTHER GABA TRANSPORTER 2 ISOFORM X1-RELATED 2 446 - -
Ahy3g2409 452 PANTHER OS05G0424000 PROTEIN-RELATED 2 446 - -
Ahy3g2409 452 Pfam Transmembrane amino acid transporter protein 28 430 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2409 Ahy-Chr3 100912872 100921186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2409 1 452 Organic Solute Cotransporters AT5G41800 78.761 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2409 - - rcu:8287746 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2728 13 102375930 102381794 Ahy3g2409 3 100912872 100921186 hybridization