Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2378 ATGACACTGAACTTGTGCTCTCCATGCTTCTCTCGCCTCCTCCTTCATCACTCTTCTTCTCCGCTCAACAAACTCCCCGAAACCTGTGCAAACCACAGCTCCAACACTCTTCTTCCAACTCTCGTCTTCTCCTCTTCTCCGTTTCTTCCCTTCACTTCCAACAACCTTTCCAGAGCTTCCCTCAGTGAAAGCCACAATGAGATTTCTCAGGATGCCGGCCAGCTCGATCACTACCAGCTCCTCCTCCGAGTCGCCGCCTCTGCCAAAGACGCCGATGATGCCTTGCTCATGATTGCACAAAACTCTTCAAGAAACGGAGGCGGCGTCGTTTCCGCCGACGATTCTTCCACCATCATCTCCGCCGCGCTTCAGCGGAACAATTCCGAGCTCGCGTTGTCCATTTTCTACGCCATGCGCTCAAGTCTCGATTCAGTTGGCGGGAATGGACCTTTTGTTGAGGGATGGAAGTGGTCGAGGCCAAATGCACATGTATATACGATCTTGATTCAGGGTTTGGCGGCATCTCTGAGGGTTTCTGATGCCCTTAGGGTGCTCAAATATATCTGTGAGGTTGGGGTATCCCCTGGTGAGGAGGTCCGATTTGGAAAGGTAGTGAGGTGTCCTAGTTGTCAGATAGCTGTTGCAGTTGCACAGCCACAACAAGGTATTCAGATTGTATCTTGTTCAAAGTGTCGCTACCAGTATGAGCTTGTTTCAGGTGACATAGTTAGTATTCAGTCAGAAGAAATCAGCATGGACATTACAGCGTGGGAAAGGGGGTTAAGATTCCTGAAATTGAAGAAGCAAAGCATTCCTGCGGCTGTTCACTCTATGGTGGTGCAAACCCCTTCTGGTATGGCTCGCACCCACAGATTTGCAACCGAGACGGTTGATGTTCCAGCACAAGAAGGTGAAAGGGTAACAGTTGCGGTGGCAGCTCCATTAAATGTATATAGAAAGGTGGGGCCCTTTAAATTTAGCCCAAGGGCCCCTGATCTCTATCCTGGCGAGGCTATGTGCATAACAAACCACAAAGATGGGCGAGAATCAATTCTGTTAAGAGCCCCAACGAAAGAAGGAAATTCATCATTACTTAATCCCTCAGTCCTCTTTCCCCTTCTTGCTGTGTTTGCCACTGGTGATGCTGCCTCTGGACTTATTGACCCCGGCTTGCCCCAAGTCCTATCAGTTGTTGCAGTTTCATCGCTTGCTGTTGGAGCCACGTTAAATTCCGTAGTTTTTCCACAGTTGAAGCAGCTTCCACAAGGGTCGGTTGAGGTTACTGCTATCAAACAACGACTTCTATCTCAGTATGATGTGATTCTGTCACGCATCAAAGACCTAAAAGAGGCTGCTGAAAAAGAGATCTGGATGTTAGCTCGAATGTGCCAACTCGAGAACAAAATTTCAGCTGTTGGAGAACCTTCTTATCGGACTCGTAGAAGTAAAGTCAAAAGGGTGCGAGAGAGCCTGCAAAACTCCCTCGGGGGAAGGATTGAATTAATTGATAGCTATGCCAGGATTTCTTCAATGATTGAAATTGAAGTGGAGATGGAAACAGATGTTCTTGCTGCTGAAACTGCTAGCAATGCGGATACTATCACAGAACAGATAGAGCAAATTATGGAGATGGAAAATCTGGAGGAGAGATGGAAAATAGAAGCAGAAGCCAATGACGAGGCCGAAAGAATCCTTAGTTCTCAACCTATGCCTTCTGAGGACGTTTAA 1728 0.4769 MTLNLCSPCFSRLLLHHSSSPLNKLPETCANHSSNTLLPTLVFSSSPFLPFTSNNLSRASLSESHNEISQDAGQLDHYQLLLRVAASAKDADDALLMIAQNSSRNGGGVVSADDSSTIISAALQRNNSELALSIFYAMRSSLDSVGGNGPFVEGWKWSRPNAHVYTILIQGLAASLRVSDALRVLKYICEVGVSPGEEVRFGKVVRCPSCQIAVAVAQPQQGIQIVSCSKCRYQYELVSGDIVSIQSEEISMDITAWERGLRFLKLKKQSIPAAVHSMVVQTPSGMARTHRFATETVDVPAQEGERVTVAVAAPLNVYRKVGPFKFSPRAPDLYPGEAMCITNHKDGRESILLRAPTKEGNSSLLNPSVLFPLLAVFATGDAASGLIDPGLPQVLSVVAVSSLAVGATLNSVVFPQLKQLPQGSVEVTAIKQRLLSQYDVILSRIKDLKEAAEKEIWMLARMCQLENKISAVGEPSYRTRRSKVKRVRESLQNSLGGRIELIDSYARISSMIEIEVEMETDVLAAETASNADTITEQIEQIMEMENLEERWKIEAEANDEAERILSSQPMPSEDV* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2378 575 Gene3D Tetratricopeptide repeat domain 98 199 IPR011990 GO:0005515
Ahy3g2378 575 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 161 195 IPR002885 -
Ahy3g2378 575 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 574 - -
Ahy3g2378 575 Coils Coil 544 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2378 Ahy-Chr3 99145414 99150608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2378 - - gmx:100781803 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2694 13 100388915 100393260 Ahy3g2378 3 99145414 99150608 hybridization