Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2197 ATGCCTCCATTACGCTCCAGTGGATTTGTTGATCCCGGTTGGGATCATGGTATTGCCCAAGATGAGCGGAAAAAGAAGGTTAGATGCAATTATTGTGGGAAAATAGTTAGTGGTGGCATATACAGATTAAAGCAGCATTTAGCCCGAGTTTCTGGTGAAGTAACATATTGTGAAAAGGCTCCTGAGGAAGTCTACTTAAGAATGAAGGAAAACCTGGAAGGGTGTCGATCCAACAAGAAACAGAAGCACATTGATGCTCAAGCATATATGAATTTTCAGTCTAATGATGATGAAGATGATGAAGAGCAAATTGAGTGTAGAAGCAAAGGGAAGCAGTTGATGGATGATAGAAGTGTATCTATAAACTTTACACCTCTTCGTTCATTAGGATATGTTGACCCAGGGTGGGAACATGGTGTTGCTCAAGATGAGAGAAAGAAGAAAGTGAAATGCAACTATTGTGAGAAAATTGTTAGTGGAGGTATTAATCGGTTTAAACAGCATCTGGCTAGAATTCCTGGAGAGGTAGCACCTTGTAAAAATGCTCCTGAAGAAGTTTATCTTAAGATTAAAGAGAATATGAAATGGCATCGCACTGGAAGGAGACATAGGCAACCTGAGGCTAAGGAATTGATTCCTTTCTATGCAAAATCAGTTAATGATGATGATGATGATGAAGAAGAAGAAGATGAATATGAGCAGATGGAAGATGCTTCGCATCATGTGAACAAGGAAACATTGATTGATGTTGATAACAGATTGTCTAAAGGCTTTAGGAAGACCTTCAAGGCAATGCCGCCAAGTACTGGTCCTGAACCTGTATTGAGAAGATCTAGGTTGGATAACATATACCTGAAACTGCCCAAGAATCAGCCTCCTCAAGCTTTCAATCAAGTCAAGGTTAAGACTGGGCCCACTAAAAAATTGCGCAAGGAAGTCATTTCTACAATTTGCAAGTTCTTTTACCATGCTGGGATTCCTGTACAGGCTGCAGACTCCTTATATTTTCATAAAATGCTTGAAGTTGTTGGTCAATATGGACAGGGACTGGTATGTCCACCAAGCCAACTTATGTCTGGTCGCTTTTTGCAGGAGGAAATAGATTCCATTAGGAATTATCTCGTCGAATACAAGGCTTCCTGGGCAATTACTGGTTGTTCTGTAATGGCAGATAGTTGGAGAGATGTACAGGGAAGAACAATTATTAACTTTCTTGTTTCTTGTCCTCATGGCGTATACTTTGTTTCTTCAGTTGATGCTACTAATGTAGTAGAAGATGCACCAAATCTATTCAAGCTTCTGGACAAGGTGGTGGAGGAAATAGGTGAGGAAAATGTGGTGCAGGTCATAACTGAAAATACTCCCAACTATAAAACTGCTGGGAAAATGCTTGAAGAGAAGCGAAGGAATTTGTTTTGGACTCCTTGTGCCACTTATTGTATTAATCGAATACTAGAAGATTTTATGAAGATAAGATGTGTGGAAGAGTGCATTGAAAAAGGCCAGAAAATTACAAAACTAATATACAATCAAATATGGTTGTTAAATCTTATGAAAAATGAATTTACTGAGGGGCAGGAGCTTTTAAACACAGCTGGGACACAGTATGCCTCTAGCTTTGCTACATTGCGGAGCTTGTTGGATCATAGAGTTGGGCTCAAAAGAATGTTTCTATCAAACAACTGGATTTCATGCAGGTTCTCCAGGACAAATGAGGGGAAAGAGGTGGAAAAAATTGTCTTGAATGTCACGTTTTGGAAGAAAATGCAGTATGTTAGAAAGTCAGTAGATCCCATCATGCATGTACTTCAAAAGGTTTGTAGTGGTGAGAGCTTCTCGATGCCATACATATATAATGATATGTACCGAGCAAAACTTGCAATCAAATCTGTTAATGGTGATGATGCACGTAAATATGAACCATTCTGGAAGGTGATAGACAGTCATTGTAACTCTCTGTTTTGTCACCCACTTTACTTGGCTGCGTACTTCTTGAATCCCTCCTACAGGTATCGGCAAGATTTTGTGGCGCATTCTGAGGTAGTCCGGGGGCTCAATGAATGTATTGTTCGGCTAGAGCCAGACAATATGAGACGGATATCTGCATCAATGCAGATTGCTCATTATAATTCTGCACAAGATGACTTTGGAACTGAATTGGCAATTAGCACAAGAACAGATCTTGAACCAGCTGCGTGGTGGCAACAACATGGAATAAGCTGCATAGAGTTGCAAAGGATAGCTGTGCGCATATTAAGTCAGACATGCTCAACCTTTGTGCGTGAGCATGAGTGGAGTATATATGATCAGATATACAGTAAAAGTCAAAATCGTCTAACACAGAAGAAACTGAATGACCTTATCTACGTGCACTACAACTTGCGACTTAGAGAATCCCAATTAAGAAAAAGGTCTAGGGACTCAAGGTCAACCTCTGTTGACAATGTTCTGCTAGAGCACTTACTCAAGGATTGGATAACGGACACCAATTTACAAAGCTCTGATGTTGATAAGAACATCTATGATGGAATTGAACAAGATGATCAATATGAAAATGATTTAATTGATTATGATGATGGAGCTGCACGATCTTTGAAGGGAACGCTTGAGCTGGAAACTATGGCTGATTTAGCAGTAGGATCACCGGATGTAGACCATGCTAACATTAATGCTGCCACTGACAATGACTCTGATCTTAATTATTTTGATGATGATTTGAGCGAGTAA 2727 0.3975 MPPLRSSGFVDPGWDHGIAQDERKKKVRCNYCGKIVSGGIYRLKQHLARVSGEVTYCEKAPEEVYLRMKENLEGCRSNKKQKHIDAQAYMNFQSNDDEDDEEQIECRSKGKQLMDDRSVSINFTPLRSLGYVDPGWEHGVAQDERKKKVKCNYCEKIVSGGINRFKQHLARIPGEVAPCKNAPEEVYLKIKENMKWHRTGRRHRQPEAKELIPFYAKSVNDDDDDEEEEDEYEQMEDASHHVNKETLIDVDNRLSKGFRKTFKAMPPSTGPEPVLRRSRLDNIYLKLPKNQPPQAFNQVKVKTGPTKKLRKEVISTICKFFYHAGIPVQAADSLYFHKMLEVVGQYGQGLVCPPSQLMSGRFLQEEIDSIRNYLVEYKASWAITGCSVMADSWRDVQGRTIINFLVSCPHGVYFVSSVDATNVVEDAPNLFKLLDKVVEEIGEENVVQVITENTPNYKTAGKMLEEKRRNLFWTPCATYCINRILEDFMKIRCVEECIEKGQKITKLIYNQIWLLNLMKNEFTEGQELLNTAGTQYASSFATLRSLLDHRVGLKRMFLSNNWISCRFSRTNEGKEVEKIVLNVTFWKKMQYVRKSVDPIMHVLQKVCSGESFSMPYIYNDMYRAKLAIKSVNGDDARKYEPFWKVIDSHCNSLFCHPLYLAAYFLNPSYRYRQDFVAHSEVVRGLNECIVRLEPDNMRRISASMQIAHYNSAQDDFGTELAISTRTDLEPAAWWQQHGISCIELQRIAVRILSQTCSTFVREHEWSIYDQIYSKSQNRLTQKKLNDLIYVHYNLRLRESQLRKRSRDSRSTSVDNVLLEHLLKDWITDTNLQSSDVDKNIYDGIEQDDQYENDLIDYDDGAARSLKGTLELETMADLAVGSPDVDHANINAATDNDSDLNYFDDDLSE* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2197 908 ProSiteProfiles Zinc finger BED-type profile. 8 64 IPR003656 GO:0003677
Ahy3g2197 908 MobiDBLite consensus disorder prediction 220 234 - -
Ahy3g2197 908 Pfam BED zinc finger 136 171 IPR003656 GO:0003677
Ahy3g2197 908 Pfam BED zinc finger 14 49 IPR003656 GO:0003677
Ahy3g2197 908 Pfam hAT family C-terminal dimerisation region 722 794 IPR008906 GO:0046983
Ahy3g2197 908 ProSiteProfiles Zinc finger BED-type profile. 130 186 IPR003656 GO:0003677
Ahy3g2197 908 Pfam Protein of unknown function (DUF 659) 353 504 IPR007021 -
Ahy3g2197 908 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 44 845 - -
Ahy3g2197 908 PANTHER HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 11 49 - -
Ahy3g2197 908 SUPERFAMILY Ribonuclease H-like 378 796 IPR012337 -
Ahy3g2197 908 MobiDBLite consensus disorder prediction 219 238 - -
Ahy3g2197 908 PANTHER OSJNBA0013A04.12 PROTEIN 44 845 - -
Ahy3g2197 908 PANTHER OSJNBA0013A04.12 PROTEIN 11 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2197 Ahy-Chr3 70503420 70509202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2197 - - aip:107630570 1804.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2444 13 56919587 56925142 Ahy3g2197 3 70503420 70509202 hybridization