Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2164 ATGGCTTTGACTCGCTCTCACTCTCTCAAAGAGAGGCTCGATGAGACTCTCGCTGGACAGAGGAATGAGATTTTGGCCCTTCTTGCTAGGATCGAGGCTAAGGGCAAGGGAATCCTGCAGCACCACCAGGTCATTGCTGAGTTTGAAGAAATCCCTGAAGAGAAGAGGCAGAAGCTATATGATGGTGCCTTTGGAGAAGTTCTGAGATCTACTCAGGAAGCTATAGTGCTGCCACCATTTGTTGCTTTGGCAGTTCGTCTAAGGCCTGGTGTTTGGGAGTACCTGCGCGTGAATGTGCACGCGCTCGTTGTTGATGAGTTACGTCCTGCTGAGTACCTCAAGTTCAAGGAAGAGCTTGTTGATGGCAGTTCCAACGGCAACTTTGTGCTTGAGTTGGACTTTGAGCCTTTTAACGCATCTTTCCCCCGCCCAACACTTAACAAGTCAATTGGGAATGGCGTTGAGTTCCTTAACCGCCACCTTTCCGCTAAGCTTTTCCATGGCAAGGAGAGCATGCAGCCATTGCTGGAGTTCCTAAGGCTTCATAGTTACAATGGAAAGACTATGATGTTGAATGACAGGATTCAAAACCTGAATTCTCTTCAACATGTTCTGAGAAAGGCAGAGGACTATCTGGTTACACTTGCTCCCGAAACACCCTACTCAGTATTCGAGCACAAATTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGTGACACCGCCGAGCGTGTCCTCGAGATGATCCAGCTTCTCCTGGATCTCCTCGAGGCACCTGACCCTTGTACCCTGGAGACATTCCTTGGAAGGATCCCTATGGTCTTCAATGTGGTGATCCTTTCTCCCCATGGTTACTTTGCTCAAGACAATGTCTTGGGATACCCTGATACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCATTGGAGAATGAGATGCTCAACCGCATCAAGAAACAAGGCTTGGACATCACACCTCGCATTCTCATTCTCACCCGGCTTCTCCCTGATGCCGTTGGAACTACTTGCGGCCAACGTCTTGAGAAGGTATTCGGCACTGAACATTGCCACATTCTTCGAGTTCCCTTTAGAACAGAGAAAGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCCTACCTAGAAACTTACACTGAGGATGCTGCTCATGAACTTGCCAAAGAGTTGAAAGGCAAGCCAGATCTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTCTGTTAGCACACAAATTGGGTGTAACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAATATCCAGAATCTGACATTTACTGGAAGAAATTTGATGACAAATATCACTTCTCATGCCAATTCACAGCTGATCTTTTTGCCATGAACCACACAGATTTCATCATCACCAGTACCTTCCAAGAAATTGCTGGAAGCAAGGACACTGTTGGACAATATGAGAGCCACACTCACTTCACCCTTCCTGGACTCTACCGTGTTGTCCACGGCATTGATGTCTTCGATCCAAAGTTTAACATTGTCTCTCCCGGTGCCGACATGAGCATTTACTTCCCATACACCGAAACCGAGCGCAGGTTGACATCCTTCCACCCGGAGATTGAAGAGCTACTGTATAGCAATGTAGAGAACGAGGAGCACATATGTGTACTGAAGGATCGTACCAAGCCAATTATCTTCACCATGGCGAGGTTGGACCGTGTGAAGAACATCACAGGACTTGTTGAGTGGTACGGCAAGAACGCCCGCCTTAGGGAGCTTGTGAACCTTGTCGTGGTCGCTGGAGACAGGCGGAAGGAGTCCAAGGACTTGGAAGAGAAAGCTGAGATGAAGAAGATGTATGGCCTCATTGAGACTTACAAGCTAAACGGCCAATTCAGGTGGATCTCCTCACAAATGAACAGAGTGAGGAATGGAGAGCTTTACCGTGTGATCTGTGACACCAAAGGTGCCTTCGTGCAGCCTGCGATCTACGAAGCGTTCGGTCTGACAGTTGTTGAGGCCATGACTTGTGGATTGCCAACATTTGCAACTTGCAATGGTGGTCCTGCTGAGATCATTGTCAATGGAAAATCGGGCTACCATATTGATCCTTACCATGGTGATCGCGCAGCTGAGATTCTTGTTGATTTCTTCGAGAAGAGCAAGGCTGATCCATCTCACTGGGACAAGATCTCTCAGGGTGGTCTCAAGCGTATTCATGAGAAGTATACGTGGCAAATTTACTCCGACCGCCTGCTGACTCTCACTGGAGTCTACGGCTTCTGGAAGCATGTGACCAACCTTGACCGCCGCGAGAGCAAGCGTTACCTTGAGATGTTCTATGCCCTCAAATACCGCATGCTGGCTGAGTCTGTGCCCCTTGCTGTCGAGTAA 2409 0.4832 MALTRSHSLKERLDETLAGQRNEILALLARIEAKGKGILQHHQVIAEFEEIPEEKRQKLYDGAFGEVLRSTQEAIVLPPFVALAVRLRPGVWEYLRVNVHALVVDELRPAEYLKFKEELVDGSSNGNFVLELDFEPFNASFPRPTLNKSIGNGVEFLNRHLSAKLFHGKESMQPLLEFLRLHSYNGKTMMLNDRIQNLNSLQHVLRKAEDYLVTLAPETPYSVFEHKFQEIGLERGWGDTAERVLEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDITPRILILTRLLPDAVGTTCGQRLEKVFGTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAHELAKELKGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFDDKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTHFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTETERRLTSFHPEIEELLYSNVENEEHICVLKDRTKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVNGKSGYHIDPYHGDRAAEILVDFFEKSKADPSHWDKISQGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYRMLAESVPLAVE* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2164 802 Gene3D Glycogen Phosphorylase B; 277 792 - -
Ahy3g2164 802 PANTHER - 3 802 IPR012820 GO:0005985|GO:0016157
Ahy3g2164 802 PANTHER SUCROSE SYNTHASE 3 802 - -
Ahy3g2164 802 Gene3D - 143 272 - -
Ahy3g2164 802 Coils Coil 10 30 - -
Ahy3g2164 802 Gene3D - 22 142 - -
Ahy3g2164 802 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 292 760 - -
Ahy3g2164 802 Gene3D Glycogen Phosphorylase B; 524 750 - -
Ahy3g2164 802 Pfam Sucrose synthase 5 550 IPR000368 GO:0005985|GO:0016157
Ahy3g2164 802 Pfam Glycosyl transferases group 1 561 735 IPR001296 GO:0016757
Ahy3g2164 802 TIGRFAM sucr_synth: sucrose synthase 21 799 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2164 Ahy-Chr3 66886620 66892543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g2164 3 802 Glycosyltransferase AT3G43190 84.750 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2164 K00695 - gmx:100806761 1499.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2411 13 55296253 55302160 Ahy3g2164 3 66886620 66892543 hybridization
Ahy1g1744 1 93589438 93593687 Ahy3g2164 3 66886620 66892543 PCT
Ahy3g2164 3 66886620 66892543 Ahy1g1744 1 93589438 93593687 PCT