Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g2012 ATGATGTTGTCGAGAGGTGAAGCTGGTAAGAAGAGTGTTGGTGGTTCTAATAACCAAAAGAGGTTGTTGAAAGATGTTGAGACTATGAGCAAAGCTCTTTACTCGGACAGAAATTCATCAAGGAATTCAATTCCAACATGGAGTTCTCGATCCAAGCCCCTTTTGCCTGATCCGAAATCAAGGCCGAAATCCGGTACTGGAGACGAAACGAATTCGCAGAAGGATAAGAGGTCCATATGGAATTGGAGGCCGTTGAAAGCCCTTTCCCATATACGCAATAAGAGATTTAATTGTAGTTTTTATCTCCAAGTCCATTTGATTGAAGGGCTGCCTTTGAATTTCGAGGATTCAGTGCTTTCCGTGTATTGGAAAAGGCGCGATGGGGTTCTGGTGACGCGGCAGGCTGTGGTGGTTGAAGGAAGGGCTGAGTTTGAAGAGAAGTTGACTTACACTTGCTCAGTGTATGGTAGTAGGAGTGGACCTCATCATTCGGCCAAGTATGAGGCCAAGCATTTCTTGCTCTATGCTTCTCTTGTTAATGCGCCTGACCTTGATTTGGGGAAGCACCGCGTCGACCTCACGAGGCTGCTTCCTCTTACGCTGGAGGAGCTTGAGGAGGAGAAGAGCTCCGGGAAGTGGACTACGAGTTTTAGGCTAACTGGATTGGCTAAGGGTGGCGTGATGAATGTTAGTTTTGGATATCTGGTTGTTGGTGATAATGCTGGTGGTTCTAGAGACAACCATCATGCTCCTAATTCATTAAATTTCAGGCAGAGTAGTTTGGCTTCAACGAAATCAGATGTTAAACCGAGACAGTTTGATGGAAGCAGCAGCATCAGGCGTGCTGGAAGTTTACAAGGTTTTATCAGTCCGTCTTTGTCTGGGTCCATAGATGAGGTAAAGGATCTTCATGAGGTATTGCCAACGTCCAAGTCTGCACTCGCCAGCTCTATCGACATCTTGTATAAGAAATTTGAAGAAGAAAAGGTACATGATCCTCTTCACAGTGAACCTGCAGTTGATGCTTTTGCCAATAGTGTTGAGCCAGTCAAACCAGATGCCTATGCTTCATCTGATCTTGGAAATGATAATGCTGAAGATCATGTCGGTAATCATACAAATACAGGTCCAGTGCATGATGAAGCTGAACTCGATGCATATCATGAAAAACTGGATACAGTTAAACAAGATGGCTATCCCCATTCCGATTCTGCAAAAGAAAACCCTGACCAGTGCCAAGGTAATGAGTTTTCTGTTGTTGATAAGGGCACAGAAATGGCACCAAATGAACCCTTTAAACTAGAAGAGTCCATGATAATGGCTCATGAGGATTCTCCTGCTGTTGATAGTAATTGTAACTTTGGTACTGAAAATCTGCAAGTATCTTCAGAAAATAGTGTGATACTTGATTCTTTTGGTGAATTAAATGAGAATTCCAATGATCAAGCACAAGTAAATGAGTTTACTTCCAAAGAGGATGGTTTATACACAAAAGAACAGCTCCTGCAAGAACTAGAATCGGCTTTAAATAGCGTATCAGATTTGGAGACAGCAGCCCTAGACTCTCCTGAAATTATGGAAACCAAATATGAACCTAAGATGAAAGAAGCACATAGCATGGATGATGTTACAGAATCAGTTGCCAGTGAATTTTTAAGCATGCTAGGCATGGAACACAGACCAATGGGCTTGAATTCTGAAGGTGATCCTGAGTCTCCAAGAGAGCTCCTTTTGAGACAATTTGAGAAGGAGGCTTTGGATGGGGGCTTCTCTTTGTTTGATTTTGGCATGGGCGATGATGATGAGGCAGATGCTGGCTACGATGCTTCTACTGGATCTGAGCACTGGAACTACTCTGAGGGTATTAGGCCATCATCATCATCCTTGTTTCAAGATATGTGCAAAGAGCATCCGGCTGAGTCTAAGGATGTGAGAGGCAAACAGAAAGCTCAGATGCTAGAAGATTTGGAAACAGAAGCCTTAATGCGGGAGTGGGGTTTGAGTGAGAAGGTTTTTCTTCAATCTCCTTCAAAAGATCGTGTTGGTTTTGGAAGTCCTATTGATCTTCCACCTGAAGAGCCTCCTACATTGCCTCCTCTTGCTGAGGGGTTGGGCCCTTTTCTACAAACAAAAGATGGGGGGTTCGTGCGGTCGATGAATCCCACTCTTTTTCAGAATTCTAAAAGTGGTGGCAGCTTAATTATGCAAGTTTCCAACCCTGTCGTGGTACCTGCTGAAATGGGCTCCGGTATAATGGAGGTTCTGCAGGGTTTAGCTTCAGTGGGAATTGAAAAGCTCTCAATGCAGGCGAAGGAATTAATGCCACTTGAAGATATCACGGGGAAGACAATGGAACAAGTAGCATGGGAAGCTATGCCTGCCATAGAGGGTACAGAGAGTAGGCAATGCAGTTTGCAACATGATTTGATAGCAGGGCAAGATAGTATTTTCATGCCAAGAGACTTGAAAGGAAGACCATCTGGGCAGAAGTTCAACCAGTCTAGTTCAAGTTCAGTGGACAACCAGACGGGCTCGGAGTTTGTTTCGTTGGAAGATCTTGCTCCTTTGGCTATGGACAAAATTGAGGCACTTTCAATGGAGGGTTTAAGAGTACAATCTGGCATGTCAAGTGAGGAGGCTCCATCAAACATCGTTTCCCAATCAATTGGGGATATTTCAGCTCTCCATGGTAAGGGGATTGATGTGAGTGGGTCCCTTGGCCTGGAAGGTGCTGCTGGTTTGCAGTTGATGGATACAAAAGGCAGCAGCAATGGTGTCGATGGAATAATGGGCCTATCTTTAACTCTTGACGAATGGATGAAGCTGGACTCTGGTGAGATCGATGATATCGATAACATTAGTGAGCATACTTCCAAGGTTCTTGCAGCCCATCATGCTAACTCTTTTGACTTCATGCGTGGGAATTCGAAGGGAGATAGGAAACGAAGTAAAGGCAGAAAATATGGTTTACTAGGAAACAATTTCACAGTAGCATTGATGGTGCAACTTCGTGATCCTATGAGAAACTATGAGCCCGTTGGAACTCCAATGCTCGCACTTATACAAGTTGAGAGAGAATTTGTCCTACCAAAGCAAAGAATTTACTGTACTGTGTCCGAGTTGAGGAACAACAACAATAATAAGGATGATGAGTGCGAGATAATAGCTAAGGTGGAGACAAAGGACGAAAGGAAAGAGGATAAAAGCTCCGAAGAAGAGCTCATTCCCCAGTTCAAAATTACTGAAGTCCATGTTGCAGGTGTGAAGAATGAGCCTCAGAAAAAGAAGCTTTGGGGAACTTCGACCCAGCAACAGTCTGGTTCGCGCTGGTTGCTTGCTAATGGAATGGGGAAGGGAAACAAGCTCCCATTGAAGTCGAAGGCTGCATCGAAATCCGGTGCTCAAGTTACCACAAAGGTGCAGCCTGGTGACACCTTGTGGAGCGTATCATCTCGAATTTACGGTACTGGCTCGAAATGGAAGGAACTGGCAAAATTTAATCCTCATATCAGAAACCCCAATGTCATTATACCAAGTGATACCATAAGACTTAGTTGA 3558 0.4418 MMLSRGEAGKKSVGGSNNQKRLLKDVETMSKALYSDRNSSRNSIPTWSSRSKPLLPDPKSRPKSGTGDETNSQKDKRSIWNWRPLKALSHIRNKRFNCSFYLQVHLIEGLPLNFEDSVLSVYWKRRDGVLVTRQAVVVEGRAEFEEKLTYTCSVYGSRSGPHHSAKYEAKHFLLYASLVNAPDLDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLTGLAKGGVMNVSFGYLVVGDNAGGSRDNHHAPNSLNFRQSSLASTKSDVKPRQFDGSSSIRRAGSLQGFISPSLSGSIDEVKDLHEVLPTSKSALASSIDILYKKFEEEKVHDPLHSEPAVDAFANSVEPVKPDAYASSDLGNDNAEDHVGNHTNTGPVHDEAELDAYHEKLDTVKQDGYPHSDSAKENPDQCQGNEFSVVDKGTEMAPNEPFKLEESMIMAHEDSPAVDSNCNFGTENLQVSSENSVILDSFGELNENSNDQAQVNEFTSKEDGLYTKEQLLQELESALNSVSDLETAALDSPEIMETKYEPKMKEAHSMDDVTESVASEFLSMLGMEHRPMGLNSEGDPESPRELLLRQFEKEALDGGFSLFDFGMGDDDEADAGYDASTGSEHWNYSEGIRPSSSSLFQDMCKEHPAESKDVRGKQKAQMLEDLETEALMREWGLSEKVFLQSPSKDRVGFGSPIDLPPEEPPTLPPLAEGLGPFLQTKDGGFVRSMNPTLFQNSKSGGSLIMQVSNPVVVPAEMGSGIMEVLQGLASVGIEKLSMQAKELMPLEDITGKTMEQVAWEAMPAIEGTESRQCSLQHDLIAGQDSIFMPRDLKGRPSGQKFNQSSSSSVDNQTGSEFVSLEDLAPLAMDKIEALSMEGLRVQSGMSSEEAPSNIVSQSIGDISALHGKGIDVSGSLGLEGAAGLQLMDTKGSSNGVDGIMGLSLTLDEWMKLDSGEIDDIDNISEHTSKVLAAHHANSFDFMRGNSKGDRKRSKGRKYGLLGNNFTVALMVQLRDPMRNYEPVGTPMLALIQVEREFVLPKQRIYCTVSELRNNNNNKDDECEIIAKVETKDERKEDKSSEEELIPQFKITEVHVAGVKNEPQKKKLWGTSTQQQSGSRWLLANGMGKGNKLPLKSKAASKSGAQVTTKVQPGDTLWSVSSRIYGTGSKWKELAKFNPHIRNPNVIIPSDTIRLS* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g2012 1185 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1184 IPR039614 -
Ahy3g2012 1185 MobiDBLite consensus disorder prediction 821 843 - -
Ahy3g2012 1185 SUPERFAMILY LysM domain 1136 1184 IPR036779 -
Ahy3g2012 1185 MobiDBLite consensus disorder prediction 827 843 - -
Ahy3g2012 1185 SMART LysM_2 1137 1185 IPR018392 -
Ahy3g2012 1185 MobiDBLite consensus disorder prediction 34 50 - -
Ahy3g2012 1185 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 93 208 IPR019448 -
Ahy3g2012 1185 Gene3D LysM domain 1126 1185 IPR036779 -
Ahy3g2012 1185 Coils Coil 498 518 - -
Ahy3g2012 1185 ProSiteProfiles LysM domain profile. 1136 1184 IPR018392 -
Ahy3g2012 1185 CDD LysM 1139 1184 IPR018392 -
Ahy3g2012 1185 Pfam LysM domain 1139 1184 IPR018392 -
Ahy3g2012 1185 MobiDBLite consensus disorder prediction 1 22 - -
Ahy3g2012 1185 ProSiteProfiles C2 NT-type domain profile. 88 236 IPR019448 -
Ahy3g2012 1185 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1184 - -
Ahy3g2012 1185 MobiDBLite consensus disorder prediction 34 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g2012 Ahy-Chr3 44786570 44790992 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g2012 - - mtr:MTR_2g040970 1578.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2293 13 47689086 47693575 Ahy3g2012 3 44786570 44790992 hybridization
Ahy11g3146 11 149079394 149084020 Ahy3g2012 3 44786570 44790992 PCT
Ahy1g1807 1 94330137 94334678 Ahy3g2012 3 44786570 44790992 PCT
Ahy3g2012 3 44786570 44790992 Ahy11g3146 11 149079394 149084020 PCT
Ahy3g2012 3 44786570 44790992 Ahy1g1807 1 94330137 94334678 PCT