Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g1872 ATGGAGAGAAAAATTCATGTGGTGCCTGTGGTGTTGTTCTTGTGGGTTTGTACTTGTGTAACTGCTTCTGTTACATACGATCACAAATCTCTTATTATAAATGGGAAAAGAAGGATCTTGATATCTGGCTCCATTCACTATCCAAGAAGCACACCCCAGATGTGGCCGGACCTTATTCAAAAGGCCAAAGACGGCGGCCTTGATGTCATTCAGACCTATGTCTTCTGGAATGGACATGAGCCTTCTCCTGGAAATTATTATTTTCAAGATAGGTATGACTTGGTGAGATTCGTCAAGCTGGCTCAACAAGCTGGCCTTTATGTTCATCTCCGCATTGGTCCTTACGTTTGTGCTGAATGGAACTTCGGGGGATTCCCTATTTGGCTAAAATATGTTCCGGGTATTGAGTTCAGAACAGACAATGGACCTTTCAAGGCTGCAATGCAAAAATTCACTCAGAAAATTGTAAGCTTGATGAAATCAGAGGGGTTGTTTCAAAGCCAGGGAGGTCCAATAATCATGTCTCAGATAGAGAATGAGTATGGACCAGTGGAATGGGAAATTGGTGCTCCTGGAAGATCATACACAAGATGGGCTGCATCAATGGCTGTGGCTCTTGACACTGGTGTTCCATGGGTTATGTGCAAGCAACAAGATGCTCCTGATCCTGTTATTGACACCTGCAATGCCTTCTACTGCGAAGGCTTCACTCCCAACAAGAATTACAAGCCCAAGATGTGGACTGAGAATTGGACTGGCTGGTACACTGCTTTTGGTGGCGCAACCCCCATCAGACCAGCAGAAGACATAGCATTCTCGGTTGCCAGATTCATTCAGAATCGCGGCTCGTTTGTTAATTACTATATGTATCATGGAGGAACTAACTTCGGCCGCACGGCTGCTGGCCGTTTCATTGCCACAAGCTATGACTACGACGCTCCCCTAGACGAATATGGACTACCAAATGAACCAAAATGGACTCATTTGAGAGATTTGCATAAAGCAATTAAACAATGTGAGCCATCTTTGGTGGCTGTGGATCCAACACTTACACTCATTGCTAACAACATTGAGGCACATGTCTACAAGACAACCACTTCCTGTGCTGCATTCCTTGCAAATTACAACACCGGATCTTCCGCAAAAGTTAGATTTGGAAACGGGGTGTATGATGTACCGGCTTGGTCTATTAGTATCCTTCCTGACTGCAAGACTGAAGTTTTCAACACTGCAAAGGTTAGTGCCCTGAGATTCGAGAGGAAGATGACTCCAGTAATCGGTAGATTTGGTTGGCTGTCATTCAATGAAGTACCCGAGTCGTCGGGTCCAAATGATCGCCTTACTGCAAATTCACTCTTGGAGCAGGTTTATGTAACCAAGGACTCTTCAGATTATTTGTGGTACATGACAGATGTCAACATTAGCCCTAATGAAGGTTTCCTAAGGAATGGTCAATCTCCTGTTCTTACAGCAATGTCAGCAGGGCATGTTCTGCATGTTTTCATTAATGGACAACTTTCAGGAACTTCATATGGTGGATTGGATAATCCTAAATTGACATTTAGTGACAGTGTTAAGCTAAGGGCTGGAAACAACAAGATTTCTTTACTTAGTGTCGCAGTCGGTCTCCCGAATGTGGGTACACACTTTGAGAAATGGAATGCTGGGGTGTTAGGTCCAGTCACATTGAACGGTCTAAATGAAGGGACAAGAGACCTATCTAAGCAGAAATGGTCTTACAAGGTTGGTCTGAAAGGCGAATCATTGAGCCTTCATACTGAAAGTGGGAGTAGCTCTGTTGATTGGGTACAAGGATCACTGCTAGCTGTAAAACAACCTTTGACATGGTACAAGACAACTTTTAGCGCTCCAGCCGGCAATGAACCGTTGGCTTTAGATATGAGTACCATGGGAAAGGGTGAAATATGGATAAATGGTCAGAGCATCGGTCGCCATTGGCCTGGATACAAGGCAGGCGGTAATTGTGGTGCTTGCAACTATGCTGGAACTTACACTGAGAAGAAATGCCTTACAAACTGTGGACAACCTTCCCAGAGATGGTACCATGTTCCTCGCGCATGGCTAAGACCAGGTGGGAACTCCTTGGTTGTGTTTGAGGAGTGGGGAGGAAATCCTGCAGGGATTTCTTTGGTGAAGAGAACATGA 2166 0.4478 MERKIHVVPVVLFLWVCTCVTASVTYDHKSLIINGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFQDRYDLVRFVKLAQQAGLYVHLRIGPYVCAEWNFGGFPIWLKYVPGIEFRTDNGPFKAAMQKFTQKIVSLMKSEGLFQSQGGPIIMSQIENEYGPVEWEIGAPGRSYTRWAASMAVALDTGVPWVMCKQQDAPDPVIDTCNAFYCEGFTPNKNYKPKMWTENWTGWYTAFGGATPIRPAEDIAFSVARFIQNRGSFVNYYMYHGGTNFGRTAAGRFIATSYDYDAPLDEYGLPNEPKWTHLRDLHKAIKQCEPSLVAVDPTLTLIANNIEAHVYKTTTSCAAFLANYNTGSSAKVRFGNGVYDVPAWSISILPDCKTEVFNTAKVSALRFERKMTPVIGRFGWLSFNEVPESSGPNDRLTANSLLEQVYVTKDSSDYLWYMTDVNISPNEGFLRNGQSPVLTAMSAGHVLHVFINGQLSGTSYGGLDNPKLTFSDSVKLRAGNNKISLLSVAVGLPNVGTHFEKWNAGVLGPVTLNGLNEGTRDLSKQKWSYKVGLKGESLSLHTESGSSSVDWVQGSLLAVKQPLTWYKTTFSAPAGNEPLALDMSTMGKGEIWINGQSIGRHWPGYKAGGNCGACNYAGTYTEKKCLTNCGQPSQRWYHVPRAWLRPGGNSLVVFEEWGGNPAGISLVKRT* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g1872 721 SUPERFAMILY Galactose-binding domain-like 397 567 IPR008979 -
Ahy3g1872 721 PANTHER BETA-GALACTOSIDASE RELATED 7 721 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 PRINTS Glycosyl hydrolase family 35 signature 167 182 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 PRINTS Glycosyl hydrolase family 35 signature 612 626 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 PRINTS Glycosyl hydrolase family 35 signature 246 261 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 PRINTS Glycosyl hydrolase family 35 signature 110 129 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 PRINTS Glycosyl hydrolase family 35 signature 34 51 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 PRINTS Glycosyl hydrolase family 35 signature 283 298 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 PRINTS Glycosyl hydrolase family 35 signature 55 73 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 PRINTS Glycosyl hydrolase family 35 signature 303 319 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 PRINTS Glycosyl hydrolase family 35 signature 639 655 IPR001944 GO:0004553|GO:0005975
Ahy3g1872 721 SUPERFAMILY Galactose-binding domain-like 577 717 IPR008979 -
Ahy3g1872 721 Gene3D - 587 721 - -
Ahy3g1872 721 Pfam Glycosyl hydrolases family 35 30 335 IPR031330 -
Ahy3g1872 721 Gene3D - 438 575 - -
Ahy3g1872 721 PANTHER BETA-GALACTOSIDASE 7 721 - -
Ahy3g1872 721 SUPERFAMILY (Trans)glycosidases 24 340 IPR017853 -
Ahy3g1872 721 Pfam Beta-sandwich domain in beta galactosidase 345 413 IPR041392 -
Ahy3g1872 721 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 169 181 IPR019801 GO:0004553|GO:0005975
Ahy3g1872 721 Gene3D Glycosidases 17 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g1872 Ahy-Chr3 40461835 40467236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g1872 11 720 Glycoside Hydrolase AT3G13750 71.529 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g1872 - - gmx:100810170 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2182 13 42272952 42278381 Ahy3g1872 3 40461835 40467236 hybridization
Ahy11g3107 11 148698228 148704417 Ahy3g1872 3 40461835 40467236 PCT
Ahy1g1857 1 95160219 95165382 Ahy3g1872 3 40461835 40467236 PCT
Ahy3g1872 3 40461835 40467236 Ahy11g3107 11 148698228 148704417 PCT
Ahy3g1872 3 40461835 40467236 Ahy1g1857 1 95160219 95165382 PCT