Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g0627 ATGGTTCCTCACGTGCCTCTTAATCCACAAGCCCCCGCGTTTGTCCCGGCTTATCAGAACACGTGGCCTTATACCGCCATTCCTACTGCACCACCACCACCACCACTGCCGCCGACAGAACCACCGTGTCAGCAAGGGGAGTTTCTCTCTCTTCCACCCAACTTTAGCCTGTATTTACCCACAGTGCCGTTACCCCTTTCTGATGGTACGAACAACACCTTCCTTTCATCACCACCAGAACCGTTTGTGGTGGTGAATGAAGAAGTTGCTGTTGCTGATTCACTGAAACAGCAGCGGCAGCTGCAGTTCAATCACCATGGATTCATGAACATCCGAGTTGGTCCGAGACGATCATATCGGCAGCAGCATCAGGCGCGAGTACTGTGGAAGCCAAAGAAAGTGAAGGAGGAAAAGGAAGATAGGAAGCAACAAGAGAAGCTCTATGGCTATGGCTATGGCTATGGAGGGAAGAGGGGGAGACAAGATTTTCGGCGCTCATCACAATATCATGGCTTGGATACTTCTTTCCCTAAAAAGAAGAATGATCCCTCCCGTGTTTCCCCAGTTCGTGAAAATGGAAATGAAACAACGGTTATGATAAAAAACATTCCTTCCAGATACACGCGAGATGATCTGGTGAAGTTTTTGGAAAATCATTGCATGGTGGAGAACAGTAAAGTAGAGCAAGGATTTGAAAAGACTGATGTTTTGGCCTTTGATTTTGTTTATCTGCCGATTGATTTCAAGACAGGATTCAACAAGGGCTACGCATTTGTGAATTTTACAACCTCAAAAGCAGCATGGAAATTCAACATAACAGCCTCGAACAGCAAATGGGAGATGTACCAATCCCAAAAGGTTCGGCAAGTTGCAAAAGCAAACATTCAGGGAAAAGAGAATCTGGAGAGGCATTTCGAGAATACGAATTTTCCATGCGAGTCTAAAGAGGTTTTGCCTGTTAGTTTTAGCGTGCCTCGTGATGGAAAGAACAAGAGTGGGGAACAGAAGACTTTGGGTGTTCTGCTGAAGCCTCGATACATTTGA 1044 0.4607 MVPHVPLNPQAPAFVPAYQNTWPYTAIPTAPPPPPLPPTEPPCQQGEFLSLPPNFSLYLPTVPLPLSDGTNNTFLSSPPEPFVVVNEEVAVADSLKQQRQLQFNHHGFMNIRVGPRRSYRQQHQARVLWKPKKVKEEKEDRKQQEKLYGYGYGYGGKRGRQDFRRSSQYHGLDTSFPKKKNDPSRVSPVRENGNETTVMIKNIPSRYTRDDLVKFLENHCMVENSKVEQGFEKTDVLAFDFVYLPIDFKTGFNKGYAFVNFTTSKAAWKFNITASNSKWEMYQSQKVRQVAKANIQGKENLERHFENTNFPCESKEVLPVSFSVPRDGKNKSGEQKTLGVLLKPRYI* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g0627 347 Pfam RNA recognition motif 2 196 305 IPR007201 -
Ahy3g0627 347 PANTHER RNA BINDING PROTEIN 110 335 - -
Ahy3g0627 347 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 1 110 335 - -
Ahy3g0627 347 Gene3D - 118 305 IPR012677 -
Ahy3g0627 347 MobiDBLite consensus disorder prediction 170 195 - -
Ahy3g0627 347 SUPERFAMILY RNA-binding domain, RBD 159 269 IPR035979 GO:0003676
Ahy3g0627 347 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 196 267 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g0627 Ahy-Chr3 6619568 6621149 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy3g0627 - - ahf:112772145 646.736