Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2236 ATGGAGAAGGTAACAAGGTTGGCATCTGAAAAGGGTGTGGTGATATTCACAAAGAGTTCATGTTGCCTATGCTATGCTGTGAACATTCTGTTCCAAGAACTTGGGGTGAACCCAACAATTCATGAGATTGATAAGGACAATGAAGGAAGAGAAATGGAAAAAGCCATAACAAGGCTTGGTTGCACTGCACCTGTCCCTGCAGTGTTCATCGGAGGCAAGCTTGTGGGCTCCACCAATGAAGTTATGTCCCTTCATCTTAGTGGCTCCCTCATCCCACTCCTCAAGCCATATAGTGCTACTTTATCTTGA 309 0.4498 MEKVTRLASEKGVVIFTKSSCCLCYAVNILFQELGVNPTIHEIDKDNEGREMEKAITRLGCTAPVPAVFIGGKLVGSTNEVMSLHLSGSLIPLLKPYSATLS* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2236 102 CDD GRX_GRXh_1_2_like 13 93 - -
Ahy2g2236 102 PANTHER GLUTAREDOXIN 1 99 IPR011905 -
Ahy2g2236 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Ahy2g2236 102 SUPERFAMILY Thioredoxin-like 1 98 IPR036249 -
Ahy2g2236 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Ahy2g2236 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Ahy2g2236 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Ahy2g2236 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 100 IPR011905 -
Ahy2g2236 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 99 - -
Ahy2g2236 102 Pfam Glutaredoxin 13 75 IPR002109 -
Ahy2g2236 102 Gene3D Glutaredoxin 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2236 Ahy-Chr2 98386219 98386847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g2236 1 99 Miscellaneous Gene Families AT4G15670 56.566 5.57e-40 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2236 K03676 - vvi:100247747 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2580 12 115169487 115170657 Ahy2g2236 2 98386219 98386847 hybridization
Ahy16g0572 16 10872626 10873355 Ahy2g2236 2 98386219 98386847 PCT
Ahy2g2236 2 98386219 98386847 Ahy6g0723 6 8900854 8901244 PCT