Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g2049 ATGGAAACTTGGGAAAGTTTTGGGAGCCATATCGAGATTGATGCTCAAAGTTTGGGAAATGGAGGAGATAGTAATGCACTGATCTTGCCAGCTAAGAAGAAAAGGAAAGGAAATAATCAGGAGCGTGGAAAAGTTGGGTCAAATAAGAAACAGAAGCTGAGCAAACCTCAGAAGAAGAAGCTGAAGAAGTTGCAGGGTGACAAGGAGAAACAACTTCTCATGGAAAAAAGCATTGAGACATTAAAAGAGAACTCACTTCCGGAGTCTGCATATTCTCTTTTGAAACCTTCATGGAAGATTGGGCGGGCTGAGACTGTGCAGGAGAAACGTATGAGGGCTGTACACTTACTGAAACAAGGATTGGAGGTTTTACATGATAATGATGAACCTAAGAAACTGGATTTTCCTCATGGAATTGAACCTGAGACAGAAGGGATTCATCTGGTGCAGGAAGTTGAGGAGAATGGAATTGTTGATATTCAATTAACAAGAACAGAAAGAGAAGTATCAAGTCCAACATATCTTGCTTTGGAATCCTCTCAAGCAACAATTCCTGCCAATGAATCTATTAATAAACCTGTAACTAAAATTCCTATTGAGAAGCAACTTGATGAAATCAGAAGTGCTTGTCTTGCATCTTGTTCTACCAATGGAATAGCAAGCACCAAGTCAAGGGATAAGACAGATGAAAATGGTAACAGAATCAATGAATTAAGCAACCCTGCAGATCCTTTTGCACAGAGACCTTCAACTACCCCTACTGTTGTGCATGTTTACAGACCAGCTGAGGTTGAAGAAAAAAGGAAGGATCTGCCTATAGTCATGATGGAGCAAGAGATAATGGAAGCTATAAATTACCATTCCAGTGTTATCATATGCGGAGAAACTGGATGTGGTAAAACAACTCAAGTTCCTCAGTTTCTTTATGAAGCTGGCTATGGTTCAAGTAAGTCCCATATTCACAGTGGTATTATCGGTGTTACTCAACCACGTCGGGTGGCTGTTCTTTCCACTGCAAGGCGTGTGGCATATGAGCTTGGTCTTCATTTGGGAAAGGAGGTTGGCTTTCAAGTTAGATATGACAAGATGATTGGAGATAGTTGTTCTATCAAGTTTATGACTGATGGAATTTTGCTAAGAGAAGTTCAGAATGATTTTTTATTGAGGCGGTATTCAGTATTAATTCTTGATGAGGCTCATGAGAGGAGCTTGAACACAGATATTCTGGTCGGGATGCTCTCACGTGTTATAAAAGTTCGCCAATTGGTTTATAATGATCAGCAAAAGAAGATACAATCAGGGCAGAGTTTAAGTCCTGAAGATCTTGTTTTTCCACTAAAACTTGTGCTGATGAGTGCTACTTTGCGAGTACAAGACTTCACTTCTGAAAGGTTATTTCCTTCTCCTCCACCTGTGATAGAGGTTCCTACAAGGCAATTTCCAGTAACAGTGTACTTTGCAAAGAAAACTGAAATAACAGATTATATTGGGGCAGCATACACGAAGGTCTTGGCAATTCATAAGAAGTTGCCTCCTGGGGGCATACTTGTTTTTGTTACTGGGCAAAGGGAAGTAGAAGACTTGTGTAGGAAGCTACGCAAAGCATCAAAGGAGTTTGTCATGAAAAAGGTTAAGGGGTCTGCAGAAAGTAATGGGACTGCAGTCCCCGACACAAATCCTGTTGAGGGAGTAAATATTAATGAGATCAATGAAGCATTTGACATTCCTGGAAATTCAGCTATCCAGCCAACTGATAGGTTTAGCGCCTATGATGAAGAAGAGATTGATGTAGATGAAAATGATTCTGACTTTTCTTATGATTCAGAAACTGAGAGTGAATTGGAATTTAATGGTGATGATAATGTTGAACAATCAGAGAATGACAGTAATATTGTAAACGTCTTAAGGCAGGAAGGAGGCCTTGCTTCTCTGAAGGCTGCTTTTGAAAAATTGTCTGGGAAATCCCCATCAAGCACCTTGAATAAGGAGCAGACTTCTGTGAATACAGAAGGTGGTTCAGACCAACCAAAAGTTTTCAGGGAGAGCAGAGCTATAGAAAATTCTAGTTCTTCTCCAGGTGCACTCTTTGTTCTTCCTCTTTATGCCATGCTGCCAGCAGCAGCCCAACTTCGTGTATTTGAAGATGTCAAGGACGGAGAGCGCCTTGTTGTTGTTGCCACAAATGTTGCTGAAACATCATTAACTATTCCAGGGATAAAGTATGTGGTTGATACTGGAAGAGAAAAAGTGAAAAATTATAACCCCTCCAATGGCATGGAGACATATGACATACAGTGGATTAGTAAGGCATCGGCCGCTCAACGTGCTGGCAGAGCTGGAAGAACTGGACCTGGACATTGTTATCGTCTGTATTCATCTGCGGCCTTTAGTAACGAATGTCCTGAGTACTCTCCAGCTGAAGTTGAGAAAGTTCCTGTTCATGGTGTTGTCCTCCTCTTAAAATCGATACATTTTAAGGATGTTAAAAAGTTCCCATTTCCTACTTCTCTTAAGAAGGATTCCCTTCTTGAAGCTGAGAATTGCTTGAAAGCTCTGGAAGCAGTGGATAAGAATGATGAACTTACACTTTTGGGAAAAGCCATGGCTCTTTATCCCTTGAGTCCTCGGCACTCCCGAATGTTGCTCACTGTTATCAAGAGTATAAGTCATGGGCATAAATGTAATCCAAGTTTGCTTTTAGCATATGCTGTTGCAGCTGCTGCCGCATTGAGTTTGTCAAATCCTTTTATTATGCAATATGAAGGAAATGAAAGTGGAAAAGATTCAGAGATGTGTGAGAAATCTGGCATGGGGGATAGTGAAAAAGACACCAATAGAAAAGAAAAGTCTAGGCGAAAGAAACTAAAAGAAACTGCTAAACAGGCACGTGAAAAATTTCGAGTTGTCACGAGTGATGCCCTGACCACAGCCTATGCGTTGCAGTGTTTCGAGCAGTCACAGAAGAAGCTGGAATTCTGTGATGCTAATGCCTTGCACTTCAAAACGATGGAGGAAATGTCAAAGCTTAGGCAACAGCTACTTAAACTGGTCTTCTATCAGAGTTCCAAAGCTGGTTTTGAAGAGTACTCTTGGATTCACGGAACTCTACAGGACATAGAACATGCTTGGCGGGTTTCTTCTGAAAAATATCCTCTTTCCGTGGTTGAGGAAAGGCTTGTTTGTCAGGCAATATGTGCTGGCTGGGCAGACAGAGTTGCCAGACGAATTACAGCAGCGTTCCGAGTCTCCAATGGAGAGAAAAGATCAAGTGCTGTTCGGTATCAATCATGCGTTGTTAAAGACACTGTTTTCCTTCATAGGTTGTCATCGGTGTCCATCGTAGCCCCCGAGTTTTTGGTTTACAATGAATTATTAGAGACAAAACGGCCAGACAAAGATGGGGTGACAAGTTCCATCAGAGCATACATGCATGGAGTAACAAGCGTGGAGCCAGCTTGGCTTGTTGAGCACGCCAAATCGAACTGCGACTTATCTAGATCCGTCATGGATCCCAAACCTTTCTACGACGCGCAGACTGACCAAGTAAAGCAGTGGGTCATCCCAACCTTTGGACGTTTCAATTGGGAGCTTCCAATGCATCCTTTGCCCATCAACAAAGATAAAAATTATGATCATCAGGTAAAAGTGTTCGCCTATGGTTTGCTTGAAGGCCAGGTTTGTCCTTGTTTAAAATCTGTCCGCAGATATATGTCAGCCTCTCCTGACAGTATTTTGAAGAATGAAGCATTGGGTCAAAAGAGGGTGGGGAATCTTTTAAGCAAATTAAGGAGCAGGCGAATCGATAGTGCTGCTACGTTGCGAACTGTGTGGAAGGAGAATCCAAAGGAATTATTTTCAGAAATCTTGGATTGGTTTCAGCAGAGTTTTCACAGCTACTTTGAAGAGTTATGGTTACAAATGCTAAGCGAAGTGCTTAGGGAGACACAAGAACACCCTCGGAAGACAAGTTCTAAGAAAAAGTCTAAGGGAATATCTAAATCACATTGA 4008 0.4162 METWESFGSHIEIDAQSLGNGGDSNALILPAKKKRKGNNQERGKVGSNKKQKLSKPQKKKLKKLQGDKEKQLLMEKSIETLKENSLPESAYSLLKPSWKIGRAETVQEKRMRAVHLLKQGLEVLHDNDEPKKLDFPHGIEPETEGIHLVQEVEENGIVDIQLTRTEREVSSPTYLALESSQATIPANESINKPVTKIPIEKQLDEIRSACLASCSTNGIASTKSRDKTDENGNRINELSNPADPFAQRPSTTPTVVHVYRPAEVEEKRKDLPIVMMEQEIMEAINYHSSVIICGETGCGKTTQVPQFLYEAGYGSSKSHIHSGIIGVTQPRRVAVLSTARRVAYELGLHLGKEVGFQVRYDKMIGDSCSIKFMTDGILLREVQNDFLLRRYSVLILDEAHERSLNTDILVGMLSRVIKVRQLVYNDQQKKIQSGQSLSPEDLVFPLKLVLMSATLRVQDFTSERLFPSPPPVIEVPTRQFPVTVYFAKKTEITDYIGAAYTKVLAIHKKLPPGGILVFVTGQREVEDLCRKLRKASKEFVMKKVKGSAESNGTAVPDTNPVEGVNINEINEAFDIPGNSAIQPTDRFSAYDEEEIDVDENDSDFSYDSETESELEFNGDDNVEQSENDSNIVNVLRQEGGLASLKAAFEKLSGKSPSSTLNKEQTSVNTEGGSDQPKVFRESRAIENSSSSPGALFVLPLYAMLPAAAQLRVFEDVKDGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYNPSNGMETYDIQWISKASAAQRAGRAGRTGPGHCYRLYSSAAFSNECPEYSPAEVEKVPVHGVVLLLKSIHFKDVKKFPFPTSLKKDSLLEAENCLKALEAVDKNDELTLLGKAMALYPLSPRHSRMLLTVIKSISHGHKCNPSLLLAYAVAAAAALSLSNPFIMQYEGNESGKDSEMCEKSGMGDSEKDTNRKEKSRRKKLKETAKQAREKFRVVTSDALTTAYALQCFEQSQKKLEFCDANALHFKTMEEMSKLRQQLLKLVFYQSSKAGFEEYSWIHGTLQDIEHAWRVSSEKYPLSVVEERLVCQAICAGWADRVARRITAAFRVSNGEKRSSAVRYQSCVVKDTVFLHRLSSVSIVAPEFLVYNELLETKRPDKDGVTSSIRAYMHGVTSVEPAWLVEHAKSNCDLSRSVMDPKPFYDAQTDQVKQWVIPTFGRFNWELPMHPLPINKDKNYDHQVKVFAYGLLEGQVCPCLKSVRRYMSASPDSILKNEALGQKRVGNLLSKLRSRRIDSAATLRTVWKENPKELFSEILDWFQQSFHSYFEELWLQMLSEVLRETQEHPRKTSSKKKSKGISKSH* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g2049 1335 MobiDBLite consensus disorder prediction 653 675 - -
Ahy2g2049 1335 SMART AAA_5 286 486 IPR003593 -
Ahy2g2049 1335 Gene3D - 654 803 IPR027417 -
Ahy2g2049 1335 Pfam DEAD/DEAH box helicase 278 459 IPR011545 GO:0003676|GO:0005524
Ahy2g2049 1335 PANTHER ATP-DEPENDENT RNA HELICASE 252 1317 - -
Ahy2g2049 1335 PANTHER - 252 1317 - -
Ahy2g2049 1335 Gene3D - 834 971 - -
Ahy2g2049 1335 Pfam Helicase conserved C-terminal domain 694 783 IPR001650 -
Ahy2g2049 1335 CDD SF2_C_RHA 686 791 - -
Ahy2g2049 1335 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 392 401 IPR002464 -
Ahy2g2049 1335 SMART ultradead3 269 485 IPR014001 -
Ahy2g2049 1335 MobiDBLite consensus disorder prediction 14 66 - -
Ahy2g2049 1335 Pfam Helicase associated domain (HA2) 845 975 IPR007502 GO:0004386
Ahy2g2049 1335 PANTHER ATP-DEPENDENT RNA HELICASE 22 126 - -
Ahy2g2049 1335 MobiDBLite consensus disorder prediction 34 48 - -
Ahy2g2049 1335 MobiDBLite consensus disorder prediction 924 957 - -
Ahy2g2049 1335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 243 885 IPR027417 -
Ahy2g2049 1335 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 643 824 IPR001650 -
Ahy2g2049 1335 MobiDBLite consensus disorder prediction 926 957 - -
Ahy2g2049 1335 MobiDBLite consensus disorder prediction 234 250 - -
Ahy2g2049 1335 MobiDBLite consensus disorder prediction 1315 1335 - -
Ahy2g2049 1335 MobiDBLite consensus disorder prediction 219 250 - -
Ahy2g2049 1335 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 281 473 IPR014001 -
Ahy2g2049 1335 PANTHER - 22 126 - -
Ahy2g2049 1335 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 1061 1159 IPR011709 -
Ahy2g2049 1335 Gene3D - 479 556 IPR027417 -
Ahy2g2049 1335 SMART ha2_5 844 977 IPR007502 GO:0004386
Ahy2g2049 1335 CDD DEXHc_DHX37 271 475 - -
Ahy2g2049 1335 Gene3D - 218 478 IPR027417 -
Ahy2g2049 1335 Coils Coil 945 965 - -
Ahy2g2049 1335 MobiDBLite consensus disorder prediction 653 676 - -
Ahy2g2049 1335 SMART helicmild6 683 783 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g2049 Ahy-Chr2 95461948 95468754 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g2049 K14780 - gmx:100788201 1837