LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy2g1949	ATGGCTCATCACCAACTCATCGACTCGCTTACCTCTCACATCTCCCTCTACCACTCCCATTCCCAATCCCAATCCTCAAACCCTAACCCTAACCCTAGATCCCAAATTCTCAAATGGTTTTCATCCCTCTCCCTCCAACACCGTCAATCCGCACTCACCATCGTCGATCCAACCTTCGTCCAAACTCTCCTCCGCATGATATCCAAGCTCCGATCCAACGGCCATGGCTCCTTCATTGTTCTTCCTGACCTTCCCTCCACTCACCCTCCATTCCTCCCCACTCTCTGCTTCAAGCGCTCCCGTGGCCTCCTTGCACGCGCTGCCGACTCCGCCGACTCGGCCGTGGCCGGGCGGGTTCTTTTTGACTCCGCCCGGCTGTTCGAGTCGGCTGAGGGAAATGAAGGCGCTGGAGCGTGCTCCTGTTCGGCGGCTTGCCTCGACGCCTTTACCGTTGCTGAGAATTTGGTGGATGACATTGACCGGTTTGTGGACGTTATGGACCGAATTTCGAATGGCGGGTTCTTGAGAGGGGAGGAGAATGAGATTGGGAATAATTGGGTTGAGCTGAATTGGCTAAAGGCAATGGGGTATTATCGGATTGAGGCGTTTTTGGCGAATAGGATTGAGGTTGCGATGCGGCTGGCGTGGTTGAATAGTGGGGGAGGAGGTGGAGGGGGAGGAGGGAGGAAGAGAGGTGTTAAGTTGAAGGAGAAGATGAATTTGGCCGGAGTCTCAGCGAATGTGTTTTGGAGGAAGAAGGGATGTGTGGATTGGTGGAGTAATCTGGATGCTGTGACAAGGAAGAGGGCCTTAACAACAATTTTGAGCAGAGCTGCAAAACCTTTGACTCGTGAAATTTTGGAAGTGGCACATAATGCCTCTCAGGATGAGATTTGGCTATACAGTGTGGGAGTTGATAAATTTCTTCAATATAACCGTACTGCATCTGCTCAAAGGACCACCACAGCATTTCCCAATGATGTAGAATTTGGAACAGTTGTTACACCATTAGCTTTTTGTAACAAACCTTCCGCTTTAGCCAGAGCCCTTAATTCTTTGCTCGTGCTTCTAGATGTTAATATGGTGATAACATCAGTTCTTAATATTGACTACGATATAGGAGAGCTATTCTTTAGTTCATTGGATTCTGTGTGTACTGTTTCTGATTGTATATTGCGAAAAATACGAGGACTCCTAATGGTTATATCACTGGACTGCACAAAATTTGAACTTCTATCAGAGGAGCTTGATAAATCTTCATCAGGAAGGTCTAAGGAAAAGCCTAGTGCGTCTAATCGTAAAAAGAAGGGACGATCCCGCAACACTAAGAAGCAAAATCATGTCCCTTACACATGTGTGAATGGTATTTCACGTGAAAAGCCACAAAAGGACATTGATTGTTTAGTGGATAATGAAAAGAAGGCTGATTTAGTGGGATCCAAGGAACCTCCTAATGATCATCTTGGAAAGGAGATTTCTACTGGGAGCATATCGTCAACTGCAAAAAAGGATCATACTCGGCGGTTGGACGCTAACAAACTTCGAACTAATTCAAGAAAAAGTAGGAAAGAGAAAAATAAATGTAAAAACACAACCACTGGCCGTGAAGCTAGCAATTTTCAAAAGTCCATTATAGATGCTGCCTCTACGACTGTTATTTCTGAAGGTGAGGTGGGAATATGTGATATGGTTTTTGATAAATCTTCCATTGAAAATGCCAAAAATGATTATTTGAATGGTAGTGACATCCACTCCTCAAGTACAAAGAACAGTTTTGCCGAGGCGATTGAGCAAGAAAATGTTGAGTATCTTTCTAAAAGTTGCAATGGTTTAGGTCCTCAGCGTTGTTTAGCATCAAATCAAGGGAAAACTATGTCTCAGGAAATAGATTGTTCAGCTTGTGATGTAGATTGTAATGGACAAAATCCTCCGGCACATGAATTGAAGCATGGTAGTTTCTCCAGTAAAGAAGATACAGGTTCTCTTAACTCCGTATGTGTTCCAGAAGCTGATGTAAAGCCATCTGTTCCTGACAAACTAACCAGAGAGGTTCATGTAAAGGAATTTGGGCTATTGAAGGAGCGAGATAGATGCCTATTTGAATGTAGAAATTCAGCTTTCTCGAAATGTAGTCCATATGAGTGGCCTGGTGTACCTTCTGTATATTTTCCATCTTTTAATTCTCATCTCCCTCCTGCTACTGATAGATTGCATTTGGATGTTGGGCGGAATTGGCATAATCACTTTTGCCACTCATTTGTCCCCACATTACAGCAGGCAAGAAACACTCCTATTGAAGGTGGACGCAACCCAATACTGTCTCATCCTATTCCTATGAGTTTAGACTGGCCTCCTGTTTTTCGTGGTGGCATGGCTGCACCGCCAAACGGTAATTATGATTCTGGTTTTATGACCCGGCGGCAGTGTACCTTTTCAAAAGGATTGGCTGTTCACAGCGTCCAGGTTGATGCAACAGCTCCAGACGATGAAAGAAAATATTCTGGGGATATATTTGATTTACCTGATATAGCAAATGCGCAAGAGCTAGCAGATGAATTTGACAATCATTGGGTATCAGAAGAAGAGTACGAGGTTCATGCTGTTTCTGGAATAGATTATAACCAATATTTCGGTGGTGGCATAATGTATTGGAACTCTTCTGATTATCCAGGAAATGGTTTCTCCCGGCCACCCTCTCTTAGCTCTGATGACAGTTTATGGGCTCTGCGTGAAGCTGATATGAATAGGGCAGTGGATGACATGGTTGCTTTCTCATCTTCATATAGTACAAATGGTCTGACTTCACCCACTGCTGCTGCCTTTTGTTCGCCTTTTGATCCTGTAGGGACTGGTCCTCAAACTGTCAGTTATGTGATGTCAAGTAATGAAGTACCTGGAAAGATATTGCATTCTTCCTCTGTTACAGATGCTGCAGGGGATGAAGATACTTCTGGTTCTTTGGGTAATAATTTAGCTGGGGAAGTGGAAGGGAAGGCGGGTGATTCACATCCATATCCCATTCTACGCCCAATAATTATTCCTAATTTATCAAGGGAAAGGTCAAGATCTGACTTTAAGCGCAGTGTTGATCATAAAAGCCCTTGTGTTCCCCCGACAAGGCGGGAGCAGCCTCGTATAAAGCGGCCACCATCACCTGTAGTGCTTTGTGTTCCACGGGCTCCACGTCCACCTCCACCATCCCCTGTGAGTGACTCCAGGAAACAAAGGGGTTTCCCTAGTGTTAGATCTGGTAGTTCCAGCCCAAGGCATTGGGGAATGAGAGGTTGGTATCATGATGGAAGTAATTTGGATGAAGCTTGCCTAAGAATGGATGGTGCCGAAGTTGTTTGGCCGTCTTGGAGAAGCAATAATCTTGCAGTGAGATCTATGATTCAGCCTTTACCTGCAGCCCTTCTGCAGGACCGCCTGATTGCTATGTCACAGATACCACGTGACCAGGAGCATCCCGATGTGACCATTCCTTTGCAACCTCCCGAGTTACAAAGCTGTTCTGCACGGAGTTCATCTTTGTCTTTGATGCATGGCCTTCTCCATGATGAGATTGATTCTTTCTGTAAACAGGTTGCTGCAGAAAATTTGAGTAGGAGGCCTTACATTAATTGGGCTGTCAAGAGAGTTACTAGATCTCTGCAGGTTCTGTGGCCAAGATCCAGGACAAATGTATTTGGTTCAAATGCAACTGGCATGTCTCTTCCCACAAGTGATGTTGACCTTGTGGTTGTCCTCCCTCCAGTGAGGAACCTGGAACCTATTAAAGAAGCTGGAATACTTGAAGGTCGTAATGGTATCAAAGAAACATGTCTTCAGCATGCAGCTAGGTATCTTGCCAACCAGGATTGGGTTAAGAGTGATTCACTGAAGACAGTGGAAAACACAGCTATACCTATTATTATGCTTGTTGTGGAAGTACCTCAGGAGGTTATATCTTCTTCTATGGTACAATCATTAAAGGAAGAACCACACTGTACTCATAATGAACATGGTAATGACAGTCATTCTGATGCTATCCAATTAGAAGATTCATCTTTTGCAAATAGCTCTGGAATAAATTTTGATTCCTCCAAAGAGTCCAAATCAGTTCGACTTGACATCAGCTTTAAGTCACCATCACATACGGGACTCCAAACAACAGAAATGGTTAAGGCATTGACAGACCAATTTCCTGCTGCTATTCCACTTGCTTTGGTACTGAAACAATTTTTGGCAGACCGGAGCCTTGATCAGTCCTACTCTGGTGGCTTAAGCTCGTATTGTTTGGTTTTACTAATTATACGCTTTCTTCAGCATGAGCACCATCTCGGCCGGTCAATCAACCAAAGCTATGGAAGCCTTCTAATGGATTTTCTTTACTTTTTTGGGAATGTGTTTGATCCTCGACAAATGCGGCTATCAGTGCAGGGAAGTGGGCTCTACATAAAAAGAGAAAGAGGTTGTAGTATTGATCCAATACACATAGATGATCCTCTTTATCCAACAAATAATGTTGGAAGGAATTGCTTCAGGATACATCAATGTATTAAGGCATTTTCAGAAGCTTATTCTGTTCTTGAGAATGAACTCACATTCCTAAACAGTGATGGCGAATCATGTTCAAAGCGACCTTACAGACTGCTTCCAAAAATCATCCCTAATCTTGATGTATCAAACTCATAA	4674	0.4392	MAHHQLIDSLTSHISLYHSHSQSQSSNPNPNPRSQILKWFSSLSLQHRQSALTIVDPTFVQTLLRMISKLRSNGHGSFIVLPDLPSTHPPFLPTLCFKRSRGLLARAADSADSAVAGRVLFDSARLFESAEGNEGAGACSCSAACLDAFTVAENLVDDIDRFVDVMDRISNGGFLRGEENEIGNNWVELNWLKAMGYYRIEAFLANRIEVAMRLAWLNSGGGGGGGGGRKRGVKLKEKMNLAGVSANVFWRKKGCVDWWSNLDAVTRKRALTTILSRAAKPLTREILEVAHNASQDEIWLYSVGVDKFLQYNRTASAQRTTTAFPNDVEFGTVVTPLAFCNKPSALARALNSLLVLLDVNMVITSVLNIDYDIGELFFSSLDSVCTVSDCILRKIRGLLMVISLDCTKFELLSEELDKSSSGRSKEKPSASNRKKKGRSRNTKKQNHVPYTCVNGISREKPQKDIDCLVDNEKKADLVGSKEPPNDHLGKEISTGSISSTAKKDHTRRLDANKLRTNSRKSRKEKNKCKNTTTGREASNFQKSIIDAASTTVISEGEVGICDMVFDKSSIENAKNDYLNGSDIHSSSTKNSFAEAIEQENVEYLSKSCNGLGPQRCLASNQGKTMSQEIDCSACDVDCNGQNPPAHELKHGSFSSKEDTGSLNSVCVPEADVKPSVPDKLTREVHVKEFGLLKERDRCLFECRNSAFSKCSPYEWPGVPSVYFPSFNSHLPPATDRLHLDVGRNWHNHFCHSFVPTLQQARNTPIEGGRNPILSHPIPMSLDWPPVFRGGMAAPPNGNYDSGFMTRRQCTFSKGLAVHSVQVDATAPDDERKYSGDIFDLPDIANAQELADEFDNHWVSEEEYEVHAVSGIDYNQYFGGGIMYWNSSDYPGNGFSRPPSLSSDDSLWALREADMNRAVDDMVAFSSSYSTNGLTSPTAAAFCSPFDPVGTGPQTVSYVMSSNEVPGKILHSSSVTDAAGDEDTSGSLGNNLAGEVEGKAGDSHPYPILRPIIIPNLSRERSRSDFKRSVDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKQRGFPSVRSGSSSPRHWGMRGWYHDGSNLDEACLRMDGAEVVWPSWRSNNLAVRSMIQPLPAALLQDRLIAMSQIPRDQEHPDVTIPLQPPELQSCSARSSSLSLMHGLLHDEIDSFCKQVAAENLSRRPYINWAVKRVTRSLQVLWPRSRTNVFGSNATGMSLPTSDVDLVVVLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKSDSLKTVENTAIPIIMLVVEVPQEVISSSMVQSLKEEPHCTHNEHGNDSHSDAIQLEDSSFANSSGINFDSSKESKSVRLDISFKSPSHTGLQTTEMVKALTDQFPAAIPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRSINQSYGSLLMDFLYFFGNVFDPRQMRLSVQGSGLYIKRERGCSIDPIHIDDPLYPTNNVGRNCFRIHQCIKAFSEAYSVLENELTFLNSDGESCSKRPYRLLPKIIPNLDVSNS*	1558

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy2g1949	1557	PANTHER	NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN	672	1551	-	-
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	476	533	-	-
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	1054	1070	-	-
	Ahy2g1949	1557	SUPERFAMILY	PAP/OAS1 substrate-binding domain	1395	1528	-	-
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	501	517	-	-
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	973	1003	-	-
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	417	455	-	-
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	1019	1094	-	-
	Ahy2g1949	1557	SUPERFAMILY	Nucleotidyltransferase	1185	1389	IPR043519	-
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	1019	1047	-	-
	Ahy2g1949	1557	Pfam	Nucleotidyltransferase domain	1210	1254	IPR002934	GO:0016779
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	429	443	-	-
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	976	990	-	-
	Ahy2g1949	1557	PANTHER	POLY(A) RNA POLYMERASE	672	1551	IPR045862	GO:0004652\|GO:0031499\|GO:0043631
	Ahy2g1949	1557	Gene3D	Beta Polymerase, domain 2	1201	1318	IPR043519	-
	Ahy2g1949	1557	MobiDBLite	consensus disorder prediction	1073	1087	-	-
	Ahy2g1949	1557	Gene3D	-	1356	1549	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy2g1949	Ahy-Chr2	93805821	93815870	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy2g1949	-		-	mtr:MTR_4g027425	2112.81

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy12g2256	12	109417756	109429234	Ahy2g1949	2	93805821	93815870	hybridization