Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1948 ATGTTGACGCTGCAGCGATTTCTGTTTGAACCAATTCACAAGCCTTTCCTACTCAATCCTCCTTCTTCTAAAAAGCCGTCGTTTCAACAACACCGTGTTTGGAGCACCAGCATCATAAAGGGTGCAATAGCAGAGTTAGAAGGAGACCTAGAGCTTCCACCAAACGCGGTTCGGAGAAAGAGGGACCCAAATTGGAGAGGTGGCTTCAGCCTCGGAATTGATTTGGGCATGGCCCGCACTGGCCTCGCCCTCACTAAAGGCTTCAACATTCGCCCTTTAACCGTTTTGGAACTGCGAGGACAGAAGCTTGAGCTCAAGATAATTAACATAGCTGAACAACAGGAGGCTGATGAGTTCATAATTGGACTTCCGAGATCTTCTGATGGGAAGGAGACGCCGCAATCCAACATTGTTCGTAGTGTGGCAGGAAGACTCGCCGTTCGAGCTGCCGATAGGGGTTGGAGAGTATACCTACAGGATGAACATGGAACAACAACAGAGGCAGTAAATCGGATGATCACTATGGGTCTAAGTAAGTCCTCTCAGCAGAGGAAGCTTGATGCCTATGCTGCCATGATGGTATTGGAAAGATACCTATCCACATCAGGTCAGGGTACCGAACTTGTTTTGCCCAAGAACCTTGAATTACAAGAAAAACTTCGAAGGGGTCCTCCCAAAGATGCCGACTTTTTCTCGGATGAAGATTAA 708 0.4774 MLTLQRFLFEPIHKPFLLNPPSSKKPSFQQHRVWSTSIIKGAIAELEGDLELPPNAVRRKRDPNWRGGFSLGIDLGMARTGLALTKGFNIRPLTVLELRGQKLELKIINIAEQQEADEFIIGLPRSSDGKETPQSNIVRSVAGRLAVRAADRGWRVYLQDEHGTTTEAVNRMITMGLSKSSQQRKLDAYAAMMVLERYLSTSGQGTELVLPKNLELQEKLRRGPPKDADFFSDED* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1948 235 Hamap Putative pre-16S rRNA nuclease [yqgF]. 68 203 IPR005227 GO:0006364
Ahy2g1948 235 SMART rnase_8s 68 168 IPR006641 GO:0006139
Ahy2g1948 235 CDD YqgF 71 199 IPR005227 GO:0006364
Ahy2g1948 235 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 71 199 IPR005227 GO:0006364
Ahy2g1948 235 Pfam Holliday junction resolvase 70 200 IPR005227 GO:0006364
Ahy2g1948 235 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 40 234 - -
Ahy2g1948 235 Gene3D - 70 207 IPR037027 GO:0006139
Ahy2g1948 235 SUPERFAMILY Ribonuclease H-like 69 201 IPR012337 -
Ahy2g1948 235 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 40 234 IPR005227 GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1948 Ahy-Chr2 93802826 93805146 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1948 - - gmx:100810356 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2255 12 109415042 109417349 Ahy2g1948 2 93802826 93805146 hybridization