Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1920 ATGTGCACTGGTGCTGAATCTCGAGGAAATATAAATGGAGATCCTATGTTGTCGTCAACAAAGGTTGTTGGAAGAGATTACAATGAAGAGAGAATAATGAGAACAAGAGAAGGTGGAAATAATGAAGTAGCTTCCAACAATGGCTTCCATAATCATCTCTTTGCTCTTCTCCCCAATCTTTCTCTCTCCGAGGTGAAAGAAGAGTTGAAATCAATTGGTAAGATTTCATGCCCAATAATAATGACTAGCCTTATGATGTATTCAAGATCTGCAATCTCTTTGTTGTTCTTGGGTCGCCAAGGAAAAGTGGAGTTAGCCGGAGGATCTTTAGCACTTGGTTTTGCAAACATAACCGCCAATTCAGTTCTAAAGGGCCTTACCATGGGAATGGACCCAATTTGTTGTCAAGCATATGGAGCTAAAAGATATTCACTTCTAAGTCAAACATTTTTTAGGGCAACATGTCTCCTTTTAGTTGTTACCATGCCAATTTCAATTCTGTGGCTAAATATGGGACCCCTCCTTCAATTACTAGGTCAAGATCCACAAGTCACAAAAGTCGCACAAGTTTACATGCTTTTTTCAATTCCTGAACTCCTAGCACAAGCACACCTTAATCCATTGAGAACTTTTCTTAGGACACAAGGTTTAACCACACCAATAACCGTCATTGCTTCTTTTGCGGCGGTTTTGCACCTACCAATCAATTATTTCTTGACTATCCACTTGAACTTAGGAGTCAAGGGAGTTGCCCTAGCCACCGGATTGAATTCCATTAACATGATACTAGGAATGTTGCTCTATCTTATCTTCTCCGATAAACCCTTGAAGCCTTGGCAAGAAGCTTCGGTTTCCACAGCATTTCGCGGGTGGAAACCGTTGCTAAACTTGGCCGTGCCGAGTTGCATTTCGGTTTGTTTGGAGTGGTGGTGGTATGAAATCATGCTCTTTCTTTGTGGGCTATTGAGTAATCCACAAGCCACGGTAGCAACAATGGGCATTCTAATTCAAACACTTGCATTACTCTATGTGTTTCCATTTTCACTAAGCATTGCATTGACAACAAGAATTGGTCACTTATTAGGTGCAATGCAACCCAACAAAGCAAAGAATAGTGCCATAATTGGTTTCACTATAGCAATTATTTCAAGCATCATAGCATTCATTTTCTTAATGTTTGTGAGGAGAAATTGGGGTAAGCTCTTCACTGATGAGACACAAATCATTGACATGGTAATAAATGTGCTTCCAATATTAGGGTTGTGTGAAATTTGCAATTGGCCACAAACAGTTTCATGTGGGATATTATCCGGTACGGCACGCCCTTACTTAGGTGCTAGGATTAATTTGTGTGCATTCTACTTAATTGGTTTGCCTGTGGCTATTTTTGCAACATTTGTCCACAAATTTGAATTGGTGGGGCTATGGTTTGGAATGTTAGCAGCACAAATTTCATGTGTTTGTATGATGATATACACATTGGTAAGAACAGATTGGAGTCACCAAACTAAGAGGGCAGTGGAGTTATCATCTCAAATAACTACTACTGAAGAGGAGATAAGTATTAGTGTAAATGATGAGGAAAGTGGGTTACTTAATTCTGATCTATGA 1611 0.3966 MCTGAESRGNINGDPMLSSTKVVGRDYNEERIMRTREGGNNEVASNNGFHNHLFALLPNLSLSEVKEELKSIGKISCPIIMTSLMMYSRSAISLLFLGRQGKVELAGGSLALGFANITANSVLKGLTMGMDPICCQAYGAKRYSLLSQTFFRATCLLLVVTMPISILWLNMGPLLQLLGQDPQVTKVAQVYMLFSIPELLAQAHLNPLRTFLRTQGLTTPITVIASFAAVLHLPINYFLTIHLNLGVKGVALATGLNSINMILGMLLYLIFSDKPLKPWQEASVSTAFRGWKPLLNLAVPSCISVCLEWWWYEIMLFLCGLLSNPQATVATMGILIQTLALLYVFPFSLSIALTTRIGHLLGAMQPNKAKNSAIIGFTIAIISSIIAFIFLMFVRRNWGKLFTDETQIIDMVINVLPILGLCEICNWPQTVSCGILSGTARPYLGARINLCAFYLIGLPVAIFATFVHKFELVGLWFGMLAAQISCVCMMIYTLVRTDWSHQTKRAVELSSQITTTEEEISISVNDEESGLLNSDL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1920 536 TIGRFAM matE: MATE efflux family protein 78 476 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy2g1920 536 CDD MATE_eukaryotic 68 505 IPR045069 GO:0042910|GO:1990961
Ahy2g1920 536 PANTHER PROTEIN DETOXIFICATION 53 52 516 - -
Ahy2g1920 536 Pfam MatE 300 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy2g1920 536 Pfam MatE 78 238 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy2g1920 536 PANTHER MULTIDRUG RESISTANCE PROTEIN 52 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1920 Ahy-Chr2 93137042 93143078 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1920 K03327 - gmx:106798137 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2211 12 108372015 108386889 Ahy2g1920 2 93137042 93143078 hybridization