Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1904 ATGGCCAGCATCAAGGACAAGGTTGTTGCATGTGTGTTTATGGTTTGCATGGCCATTGTGGGTGCACCAATAGTCCATGCTGCCATCTCATGTGGTCAAGTTAACTCTGCCCTAGCACCATGCATCCCATACCTTACAAAGGGTGGAGTAGTTTCTCCGGGGTGTTGCGGTGGCGTTAAGAGCCTTCTTGCGGCCGCCAAAACCACCCCTGACCGCCAAGCTGCATGCAACTGCCTGAAAACCGCCGCAGGCTCCATTCACGGCCTCATCGTCGCGAATGCCGAGTCTCTTCCCGGAAAATGTGGTGTTAGCATCCCTTACAAGATTAGCACCTCCACCAACTGCGCCACCATCAAGTTCTGA 363 0.5372 MASIKDKVVACVFMVCMAIVGAPIVHAAISCGQVNSALAPCIPYLTKGGVVSPGCCGGVKSLLAAAKTTPDRQAACNCLKTAAGSIHGLIVANAESLPGKCGVSIPYKISTSTNCATIKF* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1904 120 SMART aai_6 31 115 IPR016140 -
Ahy2g1904 120 CDD nsLTP1 29 115 - -
Ahy2g1904 120 Pfam Protease inhibitor/seed storage/LTP family 31 115 IPR016140 -
Ahy2g1904 120 ProSitePatterns Plant lipid transfer proteins signature. 97 118 IPR000528 GO:0006869|GO:0008289
Ahy2g1904 120 PANTHER - 6 116 IPR000528 GO:0006869|GO:0008289
Ahy2g1904 120 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Ahy2g1904 120 PRINTS Plant phospholipid transfer protein signature 106 117 IPR000528 GO:0006869|GO:0008289
Ahy2g1904 120 PRINTS Plant phospholipid transfer protein signature 88 105 IPR000528 GO:0006869|GO:0008289
Ahy2g1904 120 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Ahy2g1904 120 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Ahy2g1904 120 PRINTS Plant phospholipid transfer protein signature 71 86 IPR000528 GO:0006869|GO:0008289
Ahy2g1904 120 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED 6 116 - -
Ahy2g1904 120 Gene3D - 28 120 IPR036312 -
Ahy2g1904 120 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 118 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1904 Ahy-Chr2 92844051 92845480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1904 9 119 Acyl Lipid Metabolism Gene Families AT2G38540 54.464 3.72e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1904 - - aip:107627746 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2192 12 107974634 107976366 Ahy2g1904 2 92844051 92845480 hybridization