Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g1770 ATGGCAACATGGGTCTTATCAGAATGTGGGTTAAGGCCTCTTCCCCCAATGTTCCCTAGACCAAGAACTGGATCCATTTCATGCACCAAATCTTCTTCTATAAACTCCACATTCTTATCCTCAGATCTGAAGAGCTTCCAACAACAAACAAGGTTCCAATGTTGTAGTTTTAAGGAGAGAAGAAGAAGCTGGGAGATTAAGGTTAGTGTACCTTTAAGGGTTGGCACCATTGAGGAGGAAGAAGAAGAAGAAGAAGGAATCATCAATGGTGTTGTTGAAAAAAGAGAAGTTTGTGAATTTGACCCTGGTGCACCACCACCATTCAAATTGAGTGACATAAGAGCAGCAATACCTAAGCACTGTTGGGTGAAGGATCCATGGAGGTCAATGAGTTATGTTGTGAGAGATGTTGTTGTTGTTCTTGGTTTGGCGGCTGCTGCTGCACACCTCAACAATTGGATTGTTTGGCCTCTCTATTGGGCTGCTCAAGGAACCATGTTTTGGGCACTTTTTGTTCTTGGTCATGATTGTGGTCATGGAAGTTTCTCAAACAATCCCAAACTGAACAGTGTTGTTGGACATTTGCTGCATTCTTCAATTCTAGTACCATATCATGGATGGAGAATTAGTCATAGAACTCATCATCAAAACCATGGCCATGTTGAAAATGATGAATCTTGGCACCCGCTGCCTGAAAAAATCTTCAAGAGCTTGGACAATGTAACACGTACCTTAAGATTCACAATACCTTTTCCAATGCTTGCATATCCTATATACCTTTGGAGCAGAAGTCCTGGGAAGACAGGTTCTCACTTTCATCCAGATAGTGACTTGTTTGTCTCAAATGAGAGAAAAGATGTTATCACTTCAACAATTTGTTGGGCAGCCATGGCTTCTTTGCTAGTTGGGTTAGGGTTTGTGATGGGTCCAATCCAATTGCTTAAGCTTTATGGCATTCCTTACGTGCTTTTTGTTATGTGGTTGGACTTTGTTACTTATTTGCATCACCATGGCCATGAAGACAAATTACCATGGTACCGTGGAGAGGAATGGAGCTACCTTAGGGGCGGGCTTACAACTCTTGATCGTGACTATGGTTGGATTAATAATATTCACCATGATATTGGAACTCATGTCATACATCATCTCTTTCCTCAAATTCCCCATTATCACTTAATAGAAGCAACTGAAGCAGCAAAGCCAGTTCTTGGAAAGTATTACCGAGAGCCAAAGAAATCTCTACCTCTTCCATTTCACCTTATTGGAGATTTGATGAGAAGCATGAAGAAAGATCATTATGTTAGTGACACTGGTGATGTTGTTTACTACCAAACAGACCCTACACTTGGTGGCTCTTCTACATCAATTTAA 1371 0.4114 MATWVLSECGLRPLPPMFPRPRTGSISCTKSSSINSTFLSSDLKSFQQQTRFQCCSFKERRRSWEIKVSVPLRVGTIEEEEEEEEGIINGVVEKREVCEFDPGAPPPFKLSDIRAAIPKHCWVKDPWRSMSYVVRDVVVVLGLAAAAAHLNNWIVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPEKIFKSLDNVTRTLRFTIPFPMLAYPIYLWSRSPGKTGSHFHPDSDLFVSNERKDVITSTICWAAMASLLVGLGFVMGPIQLLKLYGIPYVLFVMWLDFVTYLHHHGHEDKLPWYRGEEWSYLRGGLTTLDRDYGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSLPLPFHLIGDLMRSMKKDHYVSDTGDVVYYQTDPTLGGSSTSI* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g1770 456 Pfam Domain of unknown function (DUF3474) 1 145 IPR021863 GO:0016717
Ahy2g1770 456 Pfam Fatty acid desaturase 154 407 IPR005804 GO:0006629
Ahy2g1770 456 PANTHER TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTIC 48 454 - -
Ahy2g1770 456 CDD Delta12-FADS-like 124 392 - -
Ahy2g1770 456 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 48 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g1770 Ahy-Chr2 90054836 90059283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g1770 1 452 Lipid Metabolism Gene Families AT3G11170 70.796 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g1770 K10257 - gmx:100217335 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2044 12 104568665 104573425 Ahy2g1770 2 90054836 90059283 hybridization