Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy2g0435 | ATGGCAGAAAAGTCATGTATCAAGCGCCTTCAGAAGGAATACAGAGCTCTTTGTAAAGAGCCAGTGTCCCATGTTGTAGCTCGCCCATCACCAAATGATATTCTTGAATGGCATTATGTGTTGGAGGGAAGCGAAGGAACACCTTTTGCAGGTGGATATTACTACGGAAAAATCAAGTTTCCTCCGGAATATCCATATAAGCCTCCTGGAATCAGCATGACTACACCTAATGGACGGTTCATGACGCAGAAAAAGATTTGTTTGTCTATGAGTGATTTTCATCCTGAAAGTTGGAATCCTATGTGGTCTGTTTCAAGCATACTCACAGGGCTTCTTTCATTCATGATGGACAACAGCCCAACCACCGGCAGTGTAAACACCACCACCGCCGAGAAGCAGCGTTTAGCAAAATCTTCCCTTTCTTTCAATTGCAAGAACGCAACATTCAGGAAAATGTTCCCCGAGTATGTGGAGAAGTACAACCAGGAGCAGCAGCTTTCCGAACAAGTTCCTCCCGAGCAGGCATCATCAGAGGCAGCGCCTAATGACACAAGTCCAAAGGCTCTTTTGGAGAAGAATTTGGATTCTACGGAAGAAGGAATGAAAAGAGTAGAACAGTTGAAGGTTGTAAAGAAAAACGGAAAGCAACCATTCCCAGCATGGATGATGTTATTACTATTCTCCATCTTTGGGGTTGTAATGGCATTACCATTGCTTCAGCTCTGA | 726 | 0.4408 | MAEKSCIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTTGSVNTTTAEKQRLAKSSLSFNCKNATFRKMFPEYVEKYNQEQQLSEQVPPEQASSEAAPNDTSPKALLEKNLDSTEEGMKRVEQLKVVKKNGKQPFPAWMMLLLFSIFGVVMALPLLQL* | 242 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy2g0435 | 241 | MobiDBLite | consensus disorder prediction | 163 | 183 | - | - | |
| Ahy2g0435 | 241 | MobiDBLite | consensus disorder prediction | 163 | 188 | - | - | |
| Ahy2g0435 | 241 | CDD | UBCc | 7 | 157 | IPR000608 | - | |
| Ahy2g0435 | 241 | ProSiteProfiles | Ubiquitin-conjugating (UBC) core domain profile. | 5 | 162 | IPR000608 | - | |
| Ahy2g0435 | 241 | Gene3D | Ubiquitin Conjugating Enzyme | 1 | 178 | IPR016135 | - | |
| Ahy2g0435 | 241 | SMART | ubc_7 | 8 | 162 | - | - | |
| Ahy2g0435 | 241 | Pfam | Ubiquitin-conjugating enzyme | 9 | 132 | IPR000608 | - | |
| Ahy2g0435 | 241 | PANTHER | BNAA06G11590D PROTEIN | 3 | 241 | - | - | |
| Ahy2g0435 | 241 | PANTHER | UBIQUITIN-CONJUGATING ENZYME E2 | 3 | 241 | - | - | |
| Ahy2g0435 | 241 | Coils | Coil | 187 | 207 | - | - | |
| Ahy2g0435 | 241 | SUPERFAMILY | UBC-like | 5 | 157 | IPR016135 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy2g0435 | Ahy-Chr2 | 6070590 | 6074878 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy2g0435 | 1 | 241 | Miscellaneous Gene Families | AT1G17280 | 78.279 | 4.07e-137 | 383 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ahy2g0435 | K04554 | - | gmx:100778181 | 428.328 |