Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0129 ATGAAGCCTGCAGCCAAGAGAAGGTCATCAACCTTCGAACCACACAACACCAACGGTGCTGCTCCTTCTCCTTCTGCTTCTGCTCATCTTCCTGCTGATTCTGTAACCGTTCCTGTTTCTGCTGCTGGGGAAGGTGCTAATGCTCTTGTTCATGGCGATTCTGGTGCTGATACTGTTGGCGCTGGTAACCAACCCGTTCCTCTCGCTGAGAACCAGAATATGGAGTTGCAGGTAGGGCAAGGAGAACACCAACAGCAGCAAAGAGAGGAGCTTCTTCGTGTTGAAGTTTCCGGACTGGAAGAAGAAGATGAAGAAATGGATGATGGTGATGATGATGCTGAAGAAGGTTCCTCTCGTCTTCCTGAGGGTTACTACGAAGTCGAAGCCATTCGTAAAAGGAGGGTCCGCAAGGGTGAGGTTCACTACTTGGTCAAATGGCTTGATTGGCCTGAGACAGCCAACACATGGGAGCCTCTGGAAAATCTGGAGGGTGTTTCTGAAATCGTCTCGGCTTTCGAGGAAAGCTGGCATTCAGCGCCGCAACGCAGGCGTAAGCGAAAGAATGTTGTTCAACATTCTGCGCTTAAGAAGAGGCTGGAGCGATCCGAGACTCCGTACAGCCTCAGACGATTTCCAGCTTCAACATCCACTAGCAACCATGCTCCATCAGCTCCTCCTCCTCAAATAACGGGCCTAAATTATGGTGACATCCCTGCCTTTCCACAGCCAGTGCTTTTCGCTGACGAAGTGGAAAACAACGGGGATGCTAGCATTGTCAGAAATGCTGCACCCCCAAATGTGAGTAGGCTTGGAAATGCTTCCGGGTCAGTCAGTGCTGCAAATGAAGAGCCCGATTATGATCCTAAGCTTAGCGAGCTTAGAGCATCAACAGCCAATGGCTCTGATGCTGACAGGCTTGCCATACAGTTCCAAGATCCTAATCCCTCGTCAGGGGATGGTCATGGAGAGGGGCAACCAAATGGTGGTTGCATGGAATCAAGCCAGGGTGGCGGCAGCAGAGGAGCCAGAAAGAGAAAATCTGGTTCTGTTAAGAGGTTTAACCGAGATTTACTCTCTGGTGAGCCTCTTAGTTTGCAGAATCCAGCTGGCACATCTGATGGCTCGGCTCAACAGGTGGTAGCCAGTAATAGGAAGGTGGATCTGCCCAGACCTTCCAACCCGATCGTAAAGATCCTAAAGCCAGTGAACTGTTTGCCGCCAATTCCAATCAGCACTCAGGATGTTGTGGTGAGCTTCTTGGCGATAAGGGCTGACGGCTCGGAGATATTGGTGGACAACCATTATCTCAAGAGGAATTATCCAATCATGCTGATCGATTTCTATGAGCAGCATCTCCGATACAGTCCTATGTCGTGA 1377 0.5025 MKPAAKRRSSTFEPHNTNGAAPSPSASAHLPADSVTVPVSAAGEGANALVHGDSGADTVGAGNQPVPLAENQNMELQVGQGEHQQQQREELLRVEVSGLEEEDEEMDDGDDDAEEGSSRLPEGYYEVEAIRKRRVRKGEVHYLVKWLDWPETANTWEPLENLEGVSEIVSAFEESWHSAPQRRRKRKNVVQHSALKKRLERSETPYSLRRFPASTSTSNHAPSAPPPQITGLNYGDIPAFPQPVLFADEVENNGDASIVRNAAPPNVSRLGNASGSVSAANEEPDYDPKLSELRASTANGSDADRLAIQFQDPNPSSGDGHGEGQPNGGCMESSQGGGSRGARKRKSGSVKRFNRDLLSGEPLSLQNPAGTSDGSAQQVVASNRKVDLPRPSNPIVKILKPVNCLPPIPISTQDVVVSFLAIRADGSEILVDNHYLKRNYPIMLIDFYEQHLRYSPMS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0129 458 MobiDBLite consensus disorder prediction 208 226 - -
Ahy2g0129 458 MobiDBLite consensus disorder prediction 258 287 - -
Ahy2g0129 458 MobiDBLite consensus disorder prediction 308 385 - -
Ahy2g0129 458 ProSiteProfiles Chromo and chromo shadow domain profile. 125 184 IPR000953 -
Ahy2g0129 458 MobiDBLite consensus disorder prediction 96 115 - -
Ahy2g0129 458 MobiDBLite consensus disorder prediction 360 382 - -
Ahy2g0129 458 CDD CD_CSD 125 174 - -
Ahy2g0129 458 MobiDBLite consensus disorder prediction 205 235 - -
Ahy2g0129 458 ProSitePatterns Chromo domain signature. 142 162 IPR023779 -
Ahy2g0129 458 SUPERFAMILY Chromo domain-like 119 183 IPR016197 -
Ahy2g0129 458 Pfam Chromo (CHRromatin Organisation MOdifier) domain 125 174 IPR023780 -
Ahy2g0129 458 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 69 456 IPR044251 GO:0006325|GO:0031507
Ahy2g0129 458 MobiDBLite consensus disorder prediction 65 85 - -
Ahy2g0129 458 SMART chromo_7 124 177 IPR000953 -
Ahy2g0129 458 Gene3D - 99 176 - -
Ahy2g0129 458 SMART ChS_2 380 457 IPR008251 GO:0005634
Ahy2g0129 458 MobiDBLite consensus disorder prediction 1 118 - -
Ahy2g0129 458 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 69 456 - -
Ahy2g0129 458 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0129 Ahy-Chr2 1439797 1443014 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0129 - - ahf:112732281 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0764 19 10847551 10850869 Ahy2g0129 2 1439797 1443014 hybridization