Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy2g0087 ATGGAACAAGTCCTGAACAAGTTACAAGGTATCTATCTAAGGAAAATGCAAATAAAGATTATTACAGATCGAATTTTCGACACCGTAAAGAATGATAGAGGAAGAGCTAATTTGAAATTTGAAGATCTGTATATTGCTGTTTTACTTGTGTACAATGATATCAATAAGTTTTTGCCTGTTACACATATTGATCCTCCATCCAAAGCCAAAGTCAGAGAAATCATGAAGGAATGTGACATCAACTTTGATGGAGAAATTGATCGAAACGAATTTTATGACTTCATCAAGCAGATCACATCAGATACAGTCACGATCGTCAGTAAACGACTCATCCTCACCTTCGCCATAGCACCAACGGTCGCCATGCTAACAAAGAAAATCACAGAAGGGATCCCACATGTTGGGAATATGGTTAGATGGTTACCCAATTCAGTTTATGCTTCAACTGTGACACTTGCAGTTTGGTGGCACCAAAAACAAAAACTCAGTTGA 492 0.376 MEQVLNKLQGIYLRKMQIKIITDRIFDTVKNDRGRANLKFEDLYIAVLLVYNDINKFLPVTHIDPPSKAKVREIMKECDINFDGEIDRNEFYDFIKQITSDTVTIVSKRLILTFAIAPTVAMLTKKITEGIPHVGNMVRWLPNSVYASTVTLAVWWHQKQKLS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy2g0087 163 PANTHER CALCIUM-BINDING EF HAND PROTEIN 5 161 - -
Ahy2g0087 163 Gene3D - 14 109 - -
Ahy2g0087 163 SUPERFAMILY EF-hand 37 99 IPR011992 -
Ahy2g0087 163 SMART efh_1 70 98 IPR002048 GO:0005509
Ahy2g0087 163 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Ahy2g0087 163 PANTHER S100 CALCIUM-BINDING PROTEIN 5 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy2g0087 Ahy-Chr2 997307 1000148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy2g0087 1 156 EF-hand Containing Proteins AT1G64850 60.897 4.78e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy2g0087 - - ahf:112777082 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0796 19 11448039 11450436 Ahy2g0087 2 997307 1000148 hybridization