Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g3049 ATGGGAAAAAGTTTTAGTCCAACACTGTTGCGAGAGCTAGAAAATCTTGACAAAGATCCAGATAGCTACAAATCAGTGATGAGATCATTGAAGTCATATGTGAAAGATTTGGACATCGAGGCAATTCCGATCTTTGTTGCACAAGTTTTCGAGACTGCGAAAATCGGCTCCTTATCGAAGGAGCTCACAGTTTCTCTCTATGAAGTTCTTGCACAGGTTCATAGTGTCAAAATTGTTCCCATGATAGGTAGTATTATGCAATCCATAGTTCAGACCTTAGCATCAAGCGCAGGATCTTTACAGATTCAGGAAGCTTGCTCAAAGGTGGTTCTAGCTATTGCAAGATATGGAATTGACCCAACAACCGCAGAAGACAAGAAGAGGAACATAATTTGTTCGCTTTGTAAGCCTCTATGTGATGGACTCTCGAGTACTCAGGAGTGTTTGACCTCCGGTGCTGCGCTCTGCTTGAAGGCTCTAGTGGATTCAGACAACTGGCGGTTTGCCTCCGATGAAATGGTTAACAAGGTTTGCCTGAATGTGGCTGCGGCGTTAGAGGGGAAGTCTCAGGCCAATGCACACATGGATTTGGTTATGTCCTTAGCTAAGTCCAATCCTTTGATTGTTGAAGCCTATGCAAGACTACTCATACAAGCAGGACTAAGAATACTAAATGCTGGAGCTGAGATATTGGAGGCGAATTTTCAGAAGCGACTTGCAGCCATTCAAATGGTGAACTTGTTGATGAAATGTATAGACTCTAGGAGTATTTTCTCAGAGTTAGAACAGATAATTGAGAAGATGGAGATCTGTCAATTTGACAACATGGCATGTGTCAAAGATGCTGCGTATGAAGCTCTGCAAACTGCCAGGAGAATTACGGCAAGCAAAAAATCATGTGTAAAGAGTCCTGCATCAGTAACAGGGTCAAATTTTAGGAGTGACTGTATGGAGGCAGATAGTTTTTATGGTGATGAAGATCATTCTCCTACTGCATGTATTTCACCAGAACCACAAACCTTGGACTTTTTTCCTGGATATGAATATGCAGTGAAGTCTCCTATTTTAGCGAGTCAACCTTCGCAGCACTCAAAATATAGTCGAAGGGGTGTGAACCGGAAGCTTTGGAGTCAAGGAAATGGACGGATTGATGTGTCTCTCAGAGATGGTTTGTTCTCAGCTGTAGCTCAGGAAAATGCCTGGTCGGGACACACTGAGAATCCGTTTTGTAATCAAGCAAGAAATTTATCAGACGAGTTTGCTGGTTTCGTGAACATGAATTCTTGTCATAGAGTATCCAGAAGTACCACCACAAGTCCCCGAAGATCACAGATTGGAGTTAATTCCGACACCATGAACAACTTTATGACCCCTCAGAAGCTCATTCACTCTCTAGAAGATCCAGATGCCGAGACTTCGTGTTGCTCCAACAGGCAGAGCAGAAGGGTCAGGAGTCTATCGACCGGCAATGTGGAGAGGAGCCGAAGATCCAACTTCGAACATGACGAAAACTGTTTCACAGACTATGTGAACTGTGATTGTAATCCAAACGGAAGCTTATTTGATTATGATGAGTTCCAAGATGGGCAAGAACCAGTCTCACCAACAGATGACATTCCTGTTGGTTCTGCTTTGCAGGTGCCTCCTGAAAATAGTGATAACATTGAGACGGTTCGCATTCGAAAACCATTTCAGAAGACTAAATATAAAGTGGTTTGTGGCCTTTCATTTGCTCTTCTTGCAATGGCTACTCCATTACTATGGATCACCAATCAGGAAGATGGTCATTATCTTGTTCCTACATAA 1806 0.4291 MGKSFSPTLLRELENLDKDPDSYKSVMRSLKSYVKDLDIEAIPIFVAQVFETAKIGSLSKELTVSLYEVLAQVHSVKIVPMIGSIMQSIVQTLASSAGSLQIQEACSKVVLAIARYGIDPTTAEDKKRNIICSLCKPLCDGLSSTQECLTSGAALCLKALVDSDNWRFASDEMVNKVCLNVAAALEGKSQANAHMDLVMSLAKSNPLIVEAYARLLIQAGLRILNAGAEILEANFQKRLAAIQMVNLLMKCIDSRSIFSELEQIIEKMEICQFDNMACVKDAAYEALQTARRITASKKSCVKSPASVTGSNFRSDCMEADSFYGDEDHSPTACISPEPQTLDFFPGYEYAVKSPILASQPSQHSKYSRRGVNRKLWSQGNGRIDVSLRDGLFSAVAQENAWSGHTENPFCNQARNLSDEFAGFVNMNSCHRVSRSTTTSPRRSQIGVNSDTMNNFMTPQKLIHSLEDPDAETSCCSNRQSRRVRSLSTGNVERSRRSNFEHDENCFTDYVNCDCNPNGSLFDYDEFQDGQEPVSPTDDIPVGSALQVPPENSDNIETVRIRKPFQKTKYKVVCGLSFALLAMATPLLWITNQEDGHYLVPT* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g3049 601 MobiDBLite consensus disorder prediction 433 454 - -
Ahy20g3049 601 SUPERFAMILY ARM repeat 8 290 IPR016024 -
Ahy20g3049 601 PANTHER PROTEIN SINE1 1 601 - -
Ahy20g3049 601 PANTHER GEMIN2 1 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g3049 Ahy-Chr20 141179229 141182037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g3049 - - gmx:100820627 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g3049 20 141179229 141182037 Ahy10g2486 10 114397776 114400916 hybridization
Ahy16g2264 16 125373984 125377367 Ahy20g3049 20 141179229 141182037 PCT
Ahy6g1935 6 94621702 94625080 Ahy20g3049 20 141179229 141182037 PCT
Ahy20g3049 20 141179229 141182037 Ahy16g2264 16 125373984 125377367 PCT
Ahy20g3049 20 141179229 141182037 Ahy6g1935 6 94621702 94625080 PCT