Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2667 ATGGGTGTTGTTCCAACTGTGCTAGTTTTACCATGCCCTGCTCAAGGACATGTCAACCCACTGATGATCTTGTCTCAAAAATTGGTTGAAAAGGGTTGCAATATCATCTTTGTCACCCCTGAATTCATCCACAACAAAGTGGTTAGTTCCATGGGGAATCAAGCCGGCGGCGATAACGGACGATCGCCGATAAAGTTGGTGTCAATCCCGGATGGGTTAGGACCTGATGCAGACAGAAATAATATCATCTTACTATTTGATTCTATATTGAAGAACATGCCTGCTATGCTTGAGAGGCTAATTGAAGATCTTAGATTGAAAGATGGTGTGAGAGTAAGCTGCATAGTTGCTGATTTTCTTATGGCATGGGCGTTGGAAATTGCAAGAAAGATTGGAATCAGAGGAGTTCTGTTTTATCCATCAGCAGCAGCTATGTTAGCCTTGCAGTGCAGCATACCAAAGCTTATTGAGGATGGAATCATAGACTCTGATGGGTTGCCAACCACAAAAAAAAGGTTTCAGTTATCACCAAGCATTCCTCCCATGGACACAGAAATCATATGGTGGGCAAAAATATCTGACTCTATAACTGAGAAGATGGTATTCAACATTAGTCTTCAATCCATGAAAACTCTAGAATCCACAGAGTGGTGCCTTTGTAACTCCACACCCGATCTTGAACCTGGAGCATTATCATTCGTACCAAAGCTATTACCAATTGGTCCATTATTAAGAACCTATGACCATGATCAAGGTGTAACTGAAAGATCATTGGGACAATTCTGGGAAGAAGATTTTTCTTGTTTAAATTGGCTTGATCAACAACCTCATGGTTCTGTTATATATGTTGCATTCGGAAGTACCACTCTTTTTGATGAAAAACAATTCAAAGAACTCGCTCTCGGACTTGAACTTACCAATAGACCCTTTCTTTGGGTGGTGCGAAAAGATTCAGATTGTAGCAATAAAGTGTGTTTTCCTAACGAATTCAAGGGGAATCAAGGTAAGATAATTGAATGGGCTCCTCAAGAAAAGGTGCTATCCCACCCTGCCATTGCTTGCTTTATAAGTCACTGCGGTTGGAATTCGACTTTGGAGGGTTTGTCTAATGGAGTGCCTTTTTTGTGTTGGCCATATTATGCTGATCAATTCTTTGACAAAAAATATATTTGTGATGAGTGGAAGGTTGGATTGGGATTTGATTTGGATGAAAATGGGATGATCTCACGTGAAGAGATAAAAGTCAAAGTTGATAAATTGCTTAGTGATGAGAACATAAGAGTTAAGGCTCGTGAGATAAAGAAGAAGCTAATGAAGGACGTTGATCTTGGTGGAAGGTCTTCAGAGAACTTAAACAAGTTCATCAACTGGTTGAAGGAATAA 1383 0.4006 MGVVPTVLVLPCPAQGHVNPLMILSQKLVEKGCNIIFVTPEFIHNKVVSSMGNQAGGDNGRSPIKLVSIPDGLGPDADRNNIILLFDSILKNMPAMLERLIEDLRLKDGVRVSCIVADFLMAWALEIARKIGIRGVLFYPSAAAMLALQCSIPKLIEDGIIDSDGLPTTKKRFQLSPSIPPMDTEIIWWAKISDSITEKMVFNISLQSMKTLESTEWCLCNSTPDLEPGALSFVPKLLPIGPLLRTYDHDQGVTERSLGQFWEEDFSCLNWLDQQPHGSVIYVAFGSTTLFDEKQFKELALGLELTNRPFLWVVRKDSDCSNKVCFPNEFKGNQGKIIEWAPQEKVLSHPAIACFISHCGWNSTLEGLSNGVPFLCWPYYADQFFDKKYICDEWKVGLGFDLDENGMISREEIKVKVDKLLSDENIRVKAREIKKKLMKDVDLGGRSSENLNKFINWLKE* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2667 460 Gene3D Glycogen Phosphorylase B; 256 439 - -
Ahy20g2667 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 424 IPR002213 GO:0008194
Ahy20g2667 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 459 - -
Ahy20g2667 460 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Ahy20g2667 460 Gene3D Glycogen Phosphorylase B; 9 451 - -
Ahy20g2667 460 CDD GT1_Gtf-like 7 455 IPR002213 GO:0008194
Ahy20g2667 460 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 4 460 - -
Ahy20g2667 460 PANTHER EG:EG0003.4 PROTEIN-RELATED 4 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2667 Ahy-Chr20 136301622 136304078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2667 5 459 Glycosyltransferase AT3G02100 46.405 1.45e-140 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2667 - - ahf:112716494 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2667 20 136301622 136304078 Ahy20g2667 20 136301622 136304078 ECH
Ahy20g2667 20 136301622 136304078 Ahy10g2162 10 110118206 110121589 hybridization
Ahy14g2965 14 138386994 138390097 Ahy20g2667 20 136301622 136304078 PCT
Ahy4g2614 4 124068462 124070883 Ahy20g2667 20 136301622 136304078 PCT