Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2644 ATGATTAGCACTCCAACAGTACTAGTTATTCCATATCCAGCTCAGGGGCATGTAAACCCCATGATGAGCTTTTCACATAAGCTGGTTGATCATGGATGCAATATCATCTTTGTCAACTCAGACTTCAACCATAAGAGAGTGGTGAGATCCATGGAGAACAACAATGGTTCATCTTCACCAATAAAATTGGTGTCAATCCCAGATGGGTTGGGACCTGAACATGACAGAGTCAATTTAGGAGAGTTATCTGTTTCCATATTGAGGACCATGCCTTCAAAGCTTGAGAAGCTGATAGAAGATCTTCAAATGAATGAGGGCATTAAAGTAACTTGCGTTGTTGCTGATGTGTTCATGGGTTGGGCTTTGGAAGTTGCAAAGAAAGTGGGAATCAAAGGTGCATTCTTTTGGCCTGCGGCAGCATCAATGTTTGTGTTGCAGTATAACGTCCCCAAGCTTATTGCTGATGGCATCCTAGACACTCATGGGTCACCAACATCAACAACAAAGACCTTTTGGTTATCCTCTTGTATTCCAGCAATGGACATCAAAGTCATATGGTGGTTAAATTTGTTTGACTCTTTAGTTCAAGAGAGATTGTTTGAGTATGTGTTGCACTGCCTCCGAGATTCAGATAATGTAACTGACTGGTGGTTGTGCAATAGTACATATGAACTTGAACCACAAGCATTTTCTTGTGTGCCAAATTTATTGCCAGTAGGCCCATTATCCCGAACCTGTGATGATAATAATAAAAGTGTAGCTCCAAGATCCTTGGGACAATTCTGGGAAGAAGATTTGTCATGCATGAATTGGCTTGATCAACAACAAAACAATTCTGTTGTGTACGTAGCATTTGGTAGTATTGCTCTTTTCGACCAAAAACAATTTACTGAGCTAGCTCTTGGGCTTGAGCTGATGAACAGACCTTTCCTTTGGGTTGTTCGTCAAGATCCCAATTGCGAGAATAAGATATATTTTCCGGACGAATTTAAGGGGAATCGAGGTAAAATAGTTGGATGGGCTCCTCAACAGAAGGTGCTAAGCCACCCTGCCATAGCTTGTTTTGTAAGTCATTGTGGTTGGAATTCAACTGTGGAAGGTTTGACTAATGGAGTTCGCTTCTTGTGTTGGCCCTATTTTGCTGACCAATTTTTCAATCAAAGATACATTTGTGATGTATTAAAGGTTGGATTGGGATTTGATTTGGATGAAAATGGATTAATCTCACGTGGTGAGATTAAAGCCAAAGTGGATCAACTGCTTGATGATGAGAACACAACACCAAGGTCTCATAAGCTCATGGAGAAGTTAAAGCACAACATTGGAGAAAGAGGTGCTTCTTCAAGGAACTTAAACAGGTTTCTTACTTGGTTGAAACATTGA 1383 0.4056 MISTPTVLVIPYPAQGHVNPMMSFSHKLVDHGCNIIFVNSDFNHKRVVRSMENNNGSSSPIKLVSIPDGLGPEHDRVNLGELSVSILRTMPSKLEKLIEDLQMNEGIKVTCVVADVFMGWALEVAKKVGIKGAFFWPAAASMFVLQYNVPKLIADGILDTHGSPTSTTKTFWLSSCIPAMDIKVIWWLNLFDSLVQERLFEYVLHCLRDSDNVTDWWLCNSTYELEPQAFSCVPNLLPVGPLSRTCDDNNKSVAPRSLGQFWEEDLSCMNWLDQQQNNSVVYVAFGSIALFDQKQFTELALGLELMNRPFLWVVRQDPNCENKIYFPDEFKGNRGKIVGWAPQQKVLSHPAIACFVSHCGWNSTVEGLTNGVRFLCWPYFADQFFNQRYICDVLKVGLGFDLDENGLISRGEIKAKVDQLLDDENTTPRSHKLMEKLKHNIGERGASSRNLNRFLTWLKH* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2644 460 Gene3D Glycogen Phosphorylase B; 3 256 - -
Ahy20g2644 460 PANTHER EG:EG0003.4 PROTEIN-RELATED 4 459 - -
Ahy20g2644 460 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 4 459 - -
Ahy20g2644 460 Gene3D Glycogen Phosphorylase B; 257 440 - -
Ahy20g2644 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 265 424 IPR002213 GO:0008194
Ahy20g2644 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 458 - -
Ahy20g2644 460 CDD GT1_Gtf-like 7 450 IPR002213 GO:0008194
Ahy20g2644 460 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2644 Ahy-Chr20 135854184 135859520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2644 2 459 Glycosyltransferase AT3G02100 44.516 1.86e-132 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2644 - - ahf:114927331 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2644 20 135854184 135859520 Ahy20g2644 20 135854184 135859520 ECH
Ahy20g2644 20 135854184 135859520 Ahy10g2153 10 109964906 109969690 hybridization