Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2643 ATGAGCACCCCAACAGTGCTAGTTCTACCATCTCCAACTCAAGGGCATGTAAACCCCATGATGATCCTTTCACATAAGCTGGTTGATCATGGATGCAATATCATCTTTGTCAACTCAGACTTCAACCATAAGAGAGTAGTCAGATCCATGGACAACAACAATGAATCATCTTCACCAATAAAATTGGTGTCAATCTCAGATGGGTTGGGACCTGACCATGACAGAGTCGATCTAGGAGAGTTATGCGACTCCATGTTGAGGACCATGCCTTCAGAGCTTGAGAAGCTGATAGAAGATCTTCAAATGAACGAGGGCATTAAAGTAACTTGCGTTGTTGCTGATGTGTTCATGGGTTGGGCTTTGGAAGTTGCAAGCAAAATGGGAATCAAAGGTGCATTCTTTTGGCCTACGGCAGCATCACTGTTTGTGTTGCAGTATAACGCCTCCAACCTTGTTGCTGATGGCATCTTAGACTCTGATGGATTTCCAATCTCAGAAAAACCATTGTGGTTATCCTCTTGCATTCCAACTATGGATATTAAAGTCTCTTGGTGGCTAAATATGTTCGACCCGTTTGTTGGAAAGCAAATGTTTAAGTATGCGACGCATTGTATGCGTAATTCAAATTTGACCGAGTGGTTCCTCTGTAACAGCACACCAGAACTTGAACCTGAAGCATTTTCCTTATTACCAAACATATTATCTCCAATAGGTCCATTATTGACACCTAACAACAACAATACAATATCAGTAGGACAATTCTGGGAAGAAGATATATCTTGCATGAGTTGGTTAGATCAGCAACCTCAATGTTCTGTAGTTTATGTTGCTTTTGGAAGTCACACTCTCTTTAATCAAACACAATTTACAGAACTTGCACTTGCACTTGAACTTACCAATAGACCCTTTCTCTGGGTTGTGCGTCAAGATCCCAATTGCACCAATAAGGTGTCTCTCCCTCCCGAATTTAAGGGTTATAAAGGTAAAATAATTGGATGGGCTCCACAAAAGATGGTATTGAGCCACCCTGCCATAGCTTGTTTTGTGAGTCATTGCGGTTGGAATTCGACCATAGAAGCTTTGTCTAATGGGGTACCTCTCCTGTGTTGGCCATATTTTGGTGACCAGTTTTTCAATAAGAATTATATTTGTGATGCATTGAAAGTTGGAATGGCATTTGATTCGGATGAAAATGGAATGATCTCACGTGGAGAGATAAAAGAGAAAGTGGATCAGTTGCTTAGTAATGAGAACACAAGATCAAGGTCTCATAAGCTGATGGAAAAACTAAAGCACAACATGGAAGAAGGAAGTACTTCTTCAACGAACTTAAGCAGGTTTTTCACTTGGTTGAAAGGATAA 1362 0.4068 MSTPTVLVLPSPTQGHVNPMMILSHKLVDHGCNIIFVNSDFNHKRVVRSMDNNNESSSPIKLVSISDGLGPDHDRVDLGELCDSMLRTMPSELEKLIEDLQMNEGIKVTCVVADVFMGWALEVASKMGIKGAFFWPTAASLFVLQYNASNLVADGILDSDGFPISEKPLWLSSCIPTMDIKVSWWLNMFDPFVGKQMFKYATHCMRNSNLTEWFLCNSTPELEPEAFSLLPNILSPIGPLLTPNNNNTISVGQFWEEDISCMSWLDQQPQCSVVYVAFGSHTLFNQTQFTELALALELTNRPFLWVVRQDPNCTNKVSLPPEFKGYKGKIIGWAPQKMVLSHPAIACFVSHCGWNSTIEALSNGVPLLCWPYFGDQFFNKNYICDALKVGMAFDSDENGMISRGEIKEKVDQLLSNENTRSRSHKLMEKLKHNMEEGSTSSTNLSRFFTWLKG* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2643 453 Gene3D Glycogen Phosphorylase B; 8 444 - -
Ahy20g2643 453 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 257 416 IPR002213 GO:0008194
Ahy20g2643 453 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 447 - -
Ahy20g2643 453 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 3 452 - -
Ahy20g2643 453 Gene3D Glycogen Phosphorylase B; 250 432 - -
Ahy20g2643 453 ProSitePatterns UDP-glycosyltransferases signature. 333 376 IPR035595 -
Ahy20g2643 453 ProSitePatterns EF-hand calcium-binding domain. 394 406 IPR018247 -
Ahy20g2643 453 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 452 - -
Ahy20g2643 453 CDD GT1_Gtf-like 6 441 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2643 Ahy-Chr20 135834523 135837138 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2643 1 452 Glycosyltransferase AT3G02100 40.130 1.69e-116 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2643 - - ahf:114927331 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2643 20 135834523 135837138 Ahy20g2643 20 135834523 135837138 ECH
Ahy20g2643 20 135834523 135837138 Ahy10g2151 10 109946664 109949751 hybridization