Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2640 ATGATTAGCACTCCAACAGTGCTAGTCGTGCCATATCCAGCTCAAGGGCATGTAAACCCCATGATGAGCCTTTCACATAAGCTGGTTGAGCATGGATGCAATATCATCTTTGTCAACTCAGACTTCAACCATAAGAGAGTAGTCAGATCCATGGAGAACAACAATGGATCACCTTCACCAATCAAATTGGTGTCAATCCCAGATGGGTTGGGACCTGACCATGACAGAGTCCATCTAGGAGAGTTATGTGATTCCGTATTGAGGACCATGCCTTCAGAGCTTGAGAAGCTCATAGAAGATCTTCAATTGAATGAGGGCATTAAAGTAACTTGCATTGTTGCAGATGTGATTATGGGTTGGGCATTGGAAGTTGCACGCAAAGTGGGAATCAAAGGTGCATTATTTTGGCCTGCGGCAGCATCTATGTTTGTGTTGCAGTATAACGCTCCCAAACTTATTGCTGATGGCATCTTAGACTCTGATGGATTTGAGATCTCAAAAAAACCATTATGGTTATCCTCTTACATTCCTGGTATGGACATCGGATCTAGTTGGTGGCGAAATCTCTTTGATCCGTCAGTTGAAAAGAGAATGTTTAAATATGTGGTGCACTGCATGCGTCATTCAAATTTGACAGAGTGGTATCTCTGTAACAGCATTCAAGAACTTGAACCTGAAGCATTTTCCTTAGTACCAAAGCTATTATCGCCAATAGGCCCATTATTGACAAGGGCAACTACAAAATCATCTGGACAATTCTGGAAAGAAGATATATCTTGCATGAGTTGGCTAGATCAACAACCTCATTGTTCTGTAGTTTATGTTGCCTTTGGTAGTCACACACTACTTGACCAAAGACAATTCACAGAACTTGCACTTGGACTTGAACTCACCAATAGACCTTTTCTTTGGGTTGTGCGTCAAGATCCTAATTGCACCAATAAAATGTGTCTCCCTCTTGAATTCAAGGGTTATAGAGGTAAAATAACTGGATGGGCTCCTCAAAAGAAGGTGCTAAGTCACCCTGCTATAGCTTGTTTTGTAAGTCATTGCGGTTGGAATTCGACCATAGAGGCTTTGTCTAATGGAGTGCCTCTCCTGTGTTGGCCGTATTTCGCAGACCAACTTTTCAACAAGAATTATGTTTGTGATACATTGAAGGTTGGGATGGCATTTGATTCGGATGAAAAGGGATTAGTGTCACGTAAAGAGATAAAGGCAAAAGTGGATCAGTTGCTTAGTAATGAGAATACGAGATCAAGGTCTCATAAGCTGATGGAGAAGCTAAAGCAGAATATGGAAGAAGGAAGTACTTCTTCAAAGAACTTAAGCAGGTTTCTGACTTGGTTGAAAGGATAA 1359 0.4135 MISTPTVLVVPYPAQGHVNPMMSLSHKLVEHGCNIIFVNSDFNHKRVVRSMENNNGSPSPIKLVSIPDGLGPDHDRVHLGELCDSVLRTMPSELEKLIEDLQLNEGIKVTCIVADVIMGWALEVARKVGIKGALFWPAAASMFVLQYNAPKLIADGILDSDGFEISKKPLWLSSYIPGMDIGSSWWRNLFDPSVEKRMFKYVVHCMRHSNLTEWYLCNSIQELEPEAFSLVPKLLSPIGPLLTRATTKSSGQFWKEDISCMSWLDQQPHCSVVYVAFGSHTLLDQRQFTELALGLELTNRPFLWVVRQDPNCTNKMCLPLEFKGYRGKITGWAPQKKVLSHPAIACFVSHCGWNSTIEALSNGVPLLCWPYFADQLFNKNYVCDTLKVGMAFDSDEKGLVSRKEIKAKVDQLLSNENTRSRSHKLMEKLKQNMEEGSTSSKNLSRFLTWLKG* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2640 452 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Ahy20g2640 452 Gene3D Glycogen Phosphorylase B; 9 443 - -
Ahy20g2640 452 PANTHER EG:EG0003.4 PROTEIN-RELATED 4 451 - -
Ahy20g2640 452 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 4 451 - -
Ahy20g2640 452 CDD GT1_Gtf-like 7 442 IPR002213 GO:0008194
Ahy20g2640 452 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 264 416 IPR002213 GO:0008194
Ahy20g2640 452 Gene3D Glycogen Phosphorylase B; 248 431 - -
Ahy20g2640 452 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2640 Ahy-Chr20 135772814 135775352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy20g2640 2 451 Glycosyltransferase AT3G02100 41.991 6.27e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2640 - - ahf:114927331 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2640 20 135772814 135775352 Ahy10g2148 10 109855855 109871475 hybridization
Ahy20g2640 20 135772814 135775352 Ahy14g2965 14 138386994 138390097 PCT
Ahy20g2640 20 135772814 135775352 Ahy4g2614 4 124068462 124070883 PCT
Ahy14g2959 14 138315366 138317563 Ahy20g2640 20 135772814 135775352 PCT
Ahy4g2610 4 124041166 124043690 Ahy20g2640 20 135772814 135775352 PCT