Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2443 ATGTCGTCGTCTCACGGGAACGATCCGCGTATGCCAGCGGCGGCTCGGCCATATGTGGCGCCGGCGGTGGCGCCGCAAGACCTTCCGATAGACTATGCCGGCTTCATCGCCGTCATATTCGGCGTCGCCGGCGTCATGTTCAGGTACAAGCTAGGCTCATGGCTCGCTCTCATATTCTGCGCCCAATCCGTCGCCAACATGAGGAACGTCGAGAACGATCTCAAGCAAGTCATGATGGCTATGATGTTTTCGTTAATGGGATTGTTAACAAATTATTTTGGACCTCCCAGACCCAGCAAGCAAAGTTGA 309 0.5469 MSSSHGNDPRMPAAARPYVAPAVAPQDLPIDYAGFIAVIFGVAGVMFRYKLGSWLALIFCAQSVANMRNVENDLKQVMMAMMFSLMGLLTNYFGPPRPSKQS* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2443 102 Pfam PAT complex subunit Asterix 7 99 IPR005351 GO:0030176|GO:0044183|GO:0045048
Ahy20g2443 102 PANTHER CGI-140 1 101 IPR005351 GO:0030176|GO:0044183|GO:0045048
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2443 Ahy-Chr20 130274793 130277295 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2443 K24963 - gmx:100500245 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2443 20 130274793 130277295 Ahy20g2443 20 130274793 130277295 ECH
Ahy20g2443 20 130274793 130277295 Ahy10g1962 10 105811357 105813471 hybridization