Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2417 ATGTTTTCACTCTCACCCATTGAAACCACAACAATGTTGGAACCAACACCACCACCATCTTCGCCGCCCCCCTCGACCCTGAAGGACGAGGTGGACATCGTGATTCCGACTATAAGGAATGTGGATTTTTTGGAGAAGTGGAGGGCCTTCTTTGAGCCCTACCACCTCATCATCGTCCAAGACGGTGATCCTTCCAAGGTCATTAAGGTGCCTCAAGGATTTAACTACGAGCTTTATAACCGAAACGATATTAATAGAATCTTGGGATCCAAGGCATCTTGTATCTCCATCAAAGACTCTGCTTGCCGTTGCTTTGGTTTCTTGGTTTCCAAGAAGAAGTACATTTTCACCATTGATGATGATTGCTTTGTTGCTAAAGATCCATCAGGAAAAGACATAAATGCCCTGGAGCAGCACATAAAGAACCTTGCGACACCATCAACACCATATTTCTTCAACACACTGTATGATCCGTACAGAGAAGGAGCAGATTTTGTTCGTGGATACCCATTTAGTCTCCGTGAAGGTGTTCCAACTGCAGTTTCTCATGGCCTCTGGCTCAACATTGCTGATTATGATGCCCCAACTCACCTTGTCAAGCCTCTCGACAGAAACAAAAGGTACGTAGATGCAGTGATGACAATTCCAAGGGGGGCGCTGTTCCCAATGAGTGGTATGAATTTGGCATTCAACCGTGAATTAATTGGGCCTGCCATGTACTTCGGCCTTATGGGAGATTCTCAGCCCGCTGGACGCTATGCTTCTATGTGGGCTGGTTGGTGTGTCAAGGTGATAAGTGATCATTTGGGAATAGGGGTGAAGACGGGTGTTCCATACATATGGCACAGCAAAGCAAGCAATGCATTCTTGAACCTCAAGAGGGAGTTGAAGGGAATCTTTTGGCAAGAAGAGTTGATCCCATTCTTTCAATCCGTATCGCTTTCGAAAGAATGCGATACGGCGCAGAAGTGTTACATAGAGCTCTCAAAGCAAGTAAGGGACAAGCTCGGCAAAGTTGATGATTACTTCAACAAACTTTCAGATGCAATGGTCACGTGGATTCAGTGCTGGGATGAACTCAACCCACCATCATCACAATCACAATCACAAGTGCTTTCACTTTCACTTCCGCTTCATGATGATGCTGCAATAATCTTGTCTAATGGTTCAGCATAG 1176 0.4541 MFSLSPIETTTMLEPTPPPSSPPPSTLKDEVDIVIPTIRNVDFLEKWRAFFEPYHLIIVQDGDPSKVIKVPQGFNYELYNRNDINRILGSKASCISIKDSACRCFGFLVSKKKYIFTIDDDCFVAKDPSGKDINALEQHIKNLATPSTPYFFNTLYDPYREGADFVRGYPFSLREGVPTAVSHGLWLNIADYDAPTHLVKPLDRNKRYVDAVMTIPRGALFPMSGMNLAFNRELIGPAMYFGLMGDSQPAGRYASMWAGWCVKVISDHLGIGVKTGVPYIWHSKASNAFLNLKRELKGIFWQEELIPFFQSVSLSKECDTAQKCYIELSKQVRDKLGKVDDYFNKLSDAMVTWIQCWDELNPPSSQSQSQVLSLSLPLHDDAAIILSNGSA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2417 391 PIRSF UPTG 22 365 IPR004901 GO:0016866|GO:0071669
Ahy20g2417 391 PANTHER UDP-ARABINOSE MUTASE 22 369 IPR037595 -
Ahy20g2417 391 Pfam Reversibly glycosylated polypeptide 28 361 IPR037595 -
Ahy20g2417 391 SUPERFAMILY Nucleotide-diphospho-sugar transferases 18 235 IPR029044 -
Ahy20g2417 391 CDD Glyco_tranf_GTA_type 33 127 - -
Ahy20g2417 391 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 22 369 - -
Ahy20g2417 391 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2417 Ahy-Chr20 129203260 129206291 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2417 K13379 - gmx:100816315 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2043 11 129943203 129944936 Ahy20g2417 20 129203260 129206291 ECH
Ahy20g2417 20 129203260 129206291 Ahy20g2417 20 129203260 129206291 ECH
Ahy20g2417 20 129203260 129206291 Ahy10g1926 10 104866520 104869619 hybridization