Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2335 ATGAGTTGGTGCGAAGGCGTTAAGGAACCCCGCGTTCTCGTTGCACCCGATCCTGGTAGCAGTGGAAATGGTTTGGCACGAACGATATTGCTTCGTCATCCCAAATCTGGAAATGCAACACAGTATCTCTTTGTAAATGGGGTGCTTCAAGAACTTCAGTGGTTTAAGAACTTATATGGATCTTGGTTTCTGGGAGATTATATAACTGAAGATGGTCGGTTGTATTTATCCACACCAATTGATCCTGTTTTCATCATGTTGCCTGTATTTGATGAAGCTAGAATGAAGAAAGGGGATGAGCCTGGAAAGTTCAGACAGTTAGATGAGATCTTGTTTATTGATCGGTTCCCTGATTATCAACAACTATTTTCGACTGTGGAGAACTGCATGCAAGTAGTTTGTGATGTCAAAGAAGTTGGATCCTCAAAATTCTTTAGGCTTGATGACTCAAAGGTTCTACGTTGGCTGTGCTATAAGGTTTATCAGCTGAAAGAGACACTACTGAAATTGGACAAAAACTATGCTGTTCAAGGAGAGAAAGAGACATTGATGGATGCAGTCTCTATATTAGGAGAGTACTTGAAGGATGAGCCTTGGTTAAAGCTTTTGTGTAACCACCTTAAGTTAAATATACTTGAGGTCAATGGTAAAGCACATACAAGCGTTGATGGAACTAATAGCTCACATTTATGCAATGATATACAGGAACGAAGTGATGAAAAGAAGGTTTCAAATGCGATTGCAAAGAAGGGGGGTAGACAAGCTAAGAAAATAAAAATGGAGACAGAATCACATAACATCAAAGACATGTTTACTAGGGCTACCAGAAAGAAAAGCTGA 840 0.3976 MSWCEGVKEPRVLVAPDPGSSGNGLARTILLRHPKSGNATQYLFVNGVLQELQWFKNLYGSWFLGDYITEDGRLYLSTPIDPVFIMLPVFDEARMKKGDEPGKFRQLDEILFIDRFPDYQQLFSTVENCMQVVCDVKEVGSSKFFRLDDSKVLRWLCYKVYQLKETLLKLDKNYAVQGEKETLMDAVSILGEYLKDEPWLKLLCNHLKLNILEVNGKAHTSVDGTNSSHLCNDIQERSDEKKVSNAIAKKGGRQAKKIKMETESHNIKDMFTRATRKKS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2335 279 Gene3D - 11 79 - -
Ahy20g2335 279 CDD RNase_H2-B 12 168 IPR040456 GO:0032299
Ahy20g2335 279 Pfam Ydr279p protein triple barrel domain 25 81 IPR041195 -
Ahy20g2335 279 MobiDBLite consensus disorder prediction 254 273 - -
Ahy20g2335 279 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 84 184 IPR019024 -
Ahy20g2335 279 MobiDBLite consensus disorder prediction 242 279 - -
Ahy20g2335 279 PANTHER RIBONUCLEASE H2 SUBUNIT B 1 278 IPR040456 GO:0032299
Ahy20g2335 279 Gene3D - 80 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2335 Ahy-Chr20 126967116 126971382 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2335 K10744 - gmx:100792495 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2335 20 126967116 126971382 Ahy10g1864 10 103100674 103105217 hybridization