Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy20g2297 ATGGCCGCTGAAGAGCCTAGCAAATTAGATGATCCTGAATTTCAGTGGGGAAAAAAGAAAGGTGTTGGTGGTAAGAAGAAGGATGTACAATTTTACTCGTCTTTTACCTATGATGGTGTAGAATACACACTGTATGACTCTGTGTATCTCTACAAGGAGGGTGAACCTGAGCCTTATATCGGGAAGCTTATTAAGATATGGGAAACTGCTGATAAGGCAAAGAAAGTGAAGGTTCTGTGGTATTTCCGTCCGGGTGAGATTCGGAACTTTCTCGAAGGATGCGAGGTTGGCGGGAACGAGCTGTTCTTGGCGTGTGGAGATGGAGTAGGGCTTGCAAATCTAAATCCACTGGAAGCTATTGTTGGCAAATGCAATGTTCTTTGCATTTTGAAGGATAGCAGGAATCCACAGCCATCAAATGAAGAACTACATCTGGCTGAATTTGTATTCTATCGATTCTTTGATGTAGGGCAGAGAAAAGTATTGGATAAGATAGATGATATGATTGCTGGAGTTGAAGTTAAACATATTTTTAACAATTTAGATAGACAAAAGCCTATTGGTAATGCAAAACTTGGGTTAGACAAGCCAGGAATTAGTGGGAACATTCTGAATGATAAATCAAATGACAAGTCTTTGAACACATTCGATAGGGAAAATGATGTTTCCAAGCCTTTGTTGGGCGGAAAATCTAACCCGTTTATAAAGGAAGAAAATGATACTAATGAGGCTTTCCAAACGATTGCTAATGACGAGATCAAGCCAAAACCTAATGTTCAAAAAAATGGCTTTTCAAAGTTGAAGCAAAACTCATCACTTGAAATACGGGACAATTCTACGGGTGGTGTCATCTCAGGGGAAGAAGCTAAGACAATCTCAATTGAGAAAATGATTCCAAGGGCAAAGGTTGATTCAGAAAAGGGTGCATTGAAGCTTGTTAAGGGTATTACTGGACAATCTAAGAAGGGATTGGCGGAGGATGTTGCTCCGCGAAAGGGAAAAAACGATGTTTTGGGCGAAGTTTCAAAAACAAAGATGGAGGATAATGTGCCAAATGGCAATGATGTGAATATAGCTTTGACTTCGAAGGAGAAATATAGACTACAACGAGCAAATGATTGTTGTGATGTTGAGGATGGCCCTTCCAAGAAGTTAAAGATAGATGCTAAACTCTCAAAGCCTGATAGTGACAAGTTCCGTGAAGAATCTCCTGGAATTACTCCAACGGTGGAAGCCAATCTAGATCACCATCCAACAAAAGTTATTCGAAGACCCAATATTGATGATGAGCCTCGCAAGAAGTTAAAGACAAATGAGAAAAACTCAAAAACCTCCAATGACAAGTTTCAAAAAGAATCTCCTAGAGTTACTCCAACTGTGGAACCCAACGTAGATTGCGATGCAGAAGAAGTGAATCAAAGGCCTTATGTTGAGGATGGCCCTTCCAAGAATTTAAAGACAACTGAGAAACTCCCAAAACCCCCAAGCGACAAGTTTCAAAAAGAATCTCCCGGAGTTACTCCAAGGCCGTATGTTGAGGTTGGCCCTTCCAAGAAGTTAAAGACAACTGAGAAACTCTCAAAACCCCCAAGTGACAAGTTTCAAAAAGAATCTCCCGGAGTTACTCCAAGGCCGTATGTTGAGGATGGCCCTTCCAAGAAGTTAAAGACTACTGAGAAACTCTCAAAACCCCCAAGCGACAAGTTTCGAAAGGAATCTCCCAGAGTTTCTCCATCTGAGGAACCCAAGTTGGATTGCAATGTAGCCGAAGTGACTAGAAGACCCGATGTTGATAGGAGCAAGTGGTTTAAGGAAATTCCTTGGGAAGAAAGAATGAAAACTGCTCATGAACGAGGAAAACTTGTGCTACTTGAAAATTTGGATCCATCTTTAACATCAGAACAAGTACAAGATATCATTTTTCAAGGCTTTAAAGAAAGTTGCACTGCACACATGATCCAGAAAACCGCGTGTGCTAGCCCTCATTCTGGTCAAGCTTTTGTTATATTTAAAAAAAAGGAAACAGCAGATATGGTTGTTAAAAAATTACAGGAGGATTCTCTATTAATGTCAAATGGCTGCCCACTTGTTGGAAGCATTGGGCGTCCTTGCTTTCCAGGGAAGAAGCCAGCATTTTATGGTCATTATTTTCTAGATCAAAGTCGAATGCTGCAACAACGTGAAATGAAAAATGCTGTATCTACTTCACATTGCTCACAGCCCAACAATATTGAATATGATATGGCTATGGATTGGTGCTTACTACAAAAAAGAGCAGAAAAAGCATGGTCAATATTATATCAGCATCAAGGTGATGAATTGAGGAAGCTGAAAGCCAAGCTGAAAACTAAAATCTAA 2358 0.4025 MAAEEPSKLDDPEFQWGKKKGVGGKKKDVQFYSSFTYDGVEYTLYDSVYLYKEGEPEPYIGKLIKIWETADKAKKVKVLWYFRPGEIRNFLEGCEVGGNELFLACGDGVGLANLNPLEAIVGKCNVLCILKDSRNPQPSNEELHLAEFVFYRFFDVGQRKVLDKIDDMIAGVEVKHIFNNLDRQKPIGNAKLGLDKPGISGNILNDKSNDKSLNTFDRENDVSKPLLGGKSNPFIKEENDTNEAFQTIANDEIKPKPNVQKNGFSKLKQNSSLEIRDNSTGGVISGEEAKTISIEKMIPRAKVDSEKGALKLVKGITGQSKKGLAEDVAPRKGKNDVLGEVSKTKMEDNVPNGNDVNIALTSKEKYRLQRANDCCDVEDGPSKKLKIDAKLSKPDSDKFREESPGITPTVEANLDHHPTKVIRRPNIDDEPRKKLKTNEKNSKTSNDKFQKESPRVTPTVEPNVDCDAEEVNQRPYVEDGPSKNLKTTEKLPKPPSDKFQKESPGVTPRPYVEVGPSKKLKTTEKLSKPPSDKFQKESPGVTPRPYVEDGPSKKLKTTEKLSKPPSDKFRKESPRVSPSEEPKLDCNVAEVTRRPDVDRSKWFKEIPWEERMKTAHERGKLVLLENLDPSLTSEQVQDIIFQGFKESCTAHMIQKTACASPHSGQAFVIFKKKETADMVVKKLQEDSLLMSNGCPLVGSIGRPCFPGKKPAFYGHYFLDQSRMLQQREMKNAVSTSHCSQPNNIEYDMAMDWCLLQKRAEKAWSILYQHQGDELRKLKAKLKTKI* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy20g2297 785 MobiDBLite consensus disorder prediction 483 497 - -
Ahy20g2297 785 Pfam BAH domain 41 163 IPR001025 GO:0003682
Ahy20g2297 785 Gene3D - 10 164 IPR043151 -
Ahy20g2297 785 MobiDBLite consensus disorder prediction 390 583 - -
Ahy20g2297 785 PANTHER PROTEIN ANTI-SILENCING 1 5 434 - -
Ahy20g2297 785 MobiDBLite consensus disorder prediction 518 532 - -
Ahy20g2297 785 MobiDBLite consensus disorder prediction 390 404 - -
Ahy20g2297 785 Gene3D - 609 703 IPR012677 -
Ahy20g2297 785 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 620 703 IPR000504 GO:0003723
Ahy20g2297 785 ProSiteProfiles BAH domain profile. 40 165 IPR001025 GO:0003682
Ahy20g2297 785 PANTHER PROTEIN ANTI-SILENCING 1 441 783 - -
Ahy20g2297 785 SUPERFAMILY RNA-binding domain, RBD 613 693 IPR035979 GO:0003676
Ahy20g2297 785 MobiDBLite consensus disorder prediction 1 21 - -
Ahy20g2297 785 MobiDBLite consensus disorder prediction 416 450 - -
Ahy20g2297 785 PANTHER PROTEIN ANTI-SILENCING 1 5 434 - -
Ahy20g2297 785 PANTHER PROTEIN ANTI-SILENCING 1 441 783 - -
Ahy20g2297 785 MobiDBLite consensus disorder prediction 549 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy20g2297 Ahy-Chr20 126050621 126062444 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy20g2297 - - aip:107621071 1544.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2297 20 126050621 126062444 Ahy10g1834 10 102523727 102534326 hybridization